Gene Caci_6375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6375 
Symbol 
ID8337738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7336895 
End bp7337557 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content74% 
IMG OID644959476 
Producthypothetical protein 
Protein accessionYP_003117070 
Protein GI256395506 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083
[TIGR03086] conserved hypothetical protein TIGR03086 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.172776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCC TGAGCCCGTC GGACGGCCTG CTCGAGCAGG TGGCCGCCTA CAGCGCCGAA 
GCGGTGTCGG CGGTCACCCT GGAAGACCTG TCCGCGCCCA CGCCTTGCCG GCAATGGAAT
CTGCTGGCCC TGATGCTGCA CCTGAACAGC TCGCTCGGGG CCCTCATCGA CACCCTTCAG
GACGGCCGCC CGGACCTGCT CGGCGCGCTG CGGCGCGTCG GCGGGAAGCG AACCGGGAAA
CGGACCGGGA AGGGGAACGG GACCGACGTG CCGGACCCCG GCAGGCTCGG CGTCGAGGAC
GACATCGGCA TCCTGCTGGC GGCCGCCGTA CAGTACCGGA CCGAGAAGCT GGTGCGGGTC
AACGACGCCC TGCGCGAGCG GGACGGACCG GACATCGTTC TGGTGGGCGG CCGTCCGCTG
CCGTGCGACC TGGTCGCCGG CGCCGGCGCG GTGGAACTGG CGGTGCACAG CTGGGACATC
GCCCGGGCGT GCGGCAGGAT CCTGCCGATC CCGGACGCCC CGGCGGCCGA ACTGCTCGAC
CTGTCGACCC TGATCGTCGA CGGCGCCGGG CGGCCGGGAC TGTTCGCCTC GGCGGTGGCC
GCGCCGCCGG ACGCCGGACC GGGCGACCGG CTGATCGCCT TGCTGGGCCG CACTCCGGTC
TGA
 
Protein sequence
MAALSPSDGL LEQVAAYSAE AVSAVTLEDL SAPTPCRQWN LLALMLHLNS SLGALIDTLQ 
DGRPDLLGAL RRVGGKRTGK RTGKGNGTDV PDPGRLGVED DIGILLAAAV QYRTEKLVRV
NDALRERDGP DIVLVGGRPL PCDLVAGAGA VELAVHSWDI ARACGRILPI PDAPAAELLD
LSTLIVDGAG RPGLFASAVA APPDAGPGDR LIALLGRTPV