Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6221 |
Symbol | |
ID | 8337584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7161378 |
End bp | 7162226 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644959322 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003116916 |
Protein GI | 256395352 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGACC TGGAGACGCG CGAGCTGGAG TACTTCCTCG CGGTCGCGGA CGAGCTGCAC TTCGGGCGGG CCGCGGTGCG GCTCTCGATC GCTCAGCCGG CGCTGTCGAA GGCGATCCGG CGGATCGAGA ACCGGCTCGG CGTGGCATTG TTCGTGCGTT CCAGTCGGCA CGTCGAGCTG ACCGGCGCGG GAAAGGCGTT GCAGGAGCAC GGTCGGCACG CGCTCAACGC GATCAGTGCT GCGGTGCGGC ACGCGCAGAG CGCGGGCGGT GCACAGACAC ACCTGCGGCT CGTGCTCAAG CCCGGCGGCG ACGGCGGGCT GCTGTCCGGA ATGCTTGCGG CGTATGCCGA ACAGCCCGAC GCGCGGTACG TGGACATCCT GTTCAGCGGT CCGATCGACC GCGCCGAATT CCTGCTCGAC GGTCGGGCAG ACGTCGGGCT GCTCTATGCG CCCTTCGATC CGCTCGACGG CCTGGCACAC GAGATTTTGT ACACCGAGGA CCGCGTCGCC GTTCTTCCGG CTGAGCATCG ATTGGCAGGG CGTGCCTCGG TGCGGTTAAC GGAGCTCGAG GGGGAGAAGC GACCGGTCTG GAAGGGAGCC GGTAAGGATT CTGATACCGA AGGGAGCGCC GCCATCGCCG ACGTGGTCCA GATGCTGCAC ATGATCACCG TGAGCCGGGT GGTCGAGGTG CTGCCGCGCT CGCTCGTCCC GGCGCTCCCG GCCGGCGTGG TCCTCGTTCC GGTCGCCGAT GCGCCGCCGA GCCATCTCGT CCTGGCGTGG AACGAGCACG ACCGGCGGCC GTTGGTCGCT TCGTTCGTCG AGGCGGTGCT GAGGATGGCG GAGCGGTGA
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Protein sequence | MNDLETRELE YFLAVADELH FGRAAVRLSI AQPALSKAIR RIENRLGVAL FVRSSRHVEL TGAGKALQEH GRHALNAISA AVRHAQSAGG AQTHLRLVLK PGGDGGLLSG MLAAYAEQPD ARYVDILFSG PIDRAEFLLD GRADVGLLYA PFDPLDGLAH EILYTEDRVA VLPAEHRLAG RASVRLTELE GEKRPVWKGA GKDSDTEGSA AIADVVQMLH MITVSRVVEV LPRSLVPALP AGVVLVPVAD APPSHLVLAW NEHDRRPLVA SFVEAVLRMA ER
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