Gene Caci_5963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5963 
Symbol 
ID8337325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6883635 
End bp6884114 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content68% 
IMG OID644959067 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_003116662 
Protein GI256395098 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.899635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCATCG ACCTGCCGGA GGGCAAGGAA CCCATCGGCT ACGTGTGGGG CGAGATGGTG 
CCCGGCATCG GTCCCGCCGC CGCCGCGTTC TCGATGGCGG TCTACGACCG CACCACCCTG
GGCCTGCGCG AATTCGAGGC GGCACGCCTG CGCGTCGCCC AGATCAACGG CTGCCTGTTC
TGCCTGGACT GGCGCACCGA GCGCGACGGA ACGAAAGTCG AGGACGGATT CGACGCGGCG
GTCGCCGAGT GGCGCACCGT CGACGGCTTC GACGAGCGGA CCCGGCTGGC AGCGGAGTAC
GCCGAACGCT ACTGCCTGGA CCACCACAAC CTGGACGAGG AGTTCTGGAC CCGGATGCTG
GCCGTGTACT CGCAGGTGGA GGTCGTCGAG CTGACGATGT GCCTGGGGTC GTGGCTGGCT
TTCGGGCGGC TGAACCATGT GCTGGGGATC GACGCGGCGT GTGTGCTGCC AGGGCACTGA
 
Protein sequence
MIIDLPEGKE PIGYVWGEMV PGIGPAAAAF SMAVYDRTTL GLREFEAARL RVAQINGCLF 
CLDWRTERDG TKVEDGFDAA VAEWRTVDGF DERTRLAAEY AERYCLDHHN LDEEFWTRML
AVYSQVEVVE LTMCLGSWLA FGRLNHVLGI DAACVLPGH