Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5653 |
Symbol | |
ID | 8337013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6515406 |
End bp | 6516113 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644958757 |
Product | hypothetical protein |
Protein accession | YP_003116353 |
Protein GI | 256394789 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.218337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.382515 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCCCA CGCCACTCCT GATCATGGTC CACAGCCCGC TGGTGGGTCC GGCGACCTGG CAGCCGGTCG CGCGGCTGCT GCACGGCCGG CACGACGTCA TGGTGCCGAG TCTGCACGGC ATCGCCGCCG GTCCCGGACC GTACGCGCGC CGTATCGCCG AGGTAGTCGC CCGAGACGCC CGTGACACGC ATGCTGACGA GATCGTCCTG ATCGGCCACA GCGGCGCCGG CGCGTACCTG CCCGCCATCG TCGACGCCGT GGACGAGTGC GTGATCGGTA TCGCCTTCGT CGACGCCCAG CTCCCCCGCC CGGGACTGAG CGACTTCGAC GCCTCCCCGC CGGACTTCCG CGAAGCCCTG ACCGCGATGG CGCAGGACGG AATGCTCCCG CCGTGGGACC GATGGTTCCC TCCGGAGGTA CTGACAGAGC TGATTCCTCA AGCAGAGCAA CGCGAAGCGT TCCTGTCCGA ACTCCATCCG ATCGCGCTGG CCTACTTCCA GGAGCCGGCT CCGCGCACCG AGTCCTGGTC GGCGACGCAG TGCACGTACC TCCAACTCAG CGAGAGCTAC ACATACCAAG CCGACCGCGC CGAAGCCCTC GGCTGGCCCA CGACCCGCCT GGCCGCCGAC CACCTCTCGC TGGTCACCGA CCCCGAGCCC GTCGCCGACT TCCTGTCAGA GTTCGCGCGG ACGCTTGCCA ACAGCTGA
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Protein sequence | MPPTPLLIMV HSPLVGPATW QPVARLLHGR HDVMVPSLHG IAAGPGPYAR RIAEVVARDA RDTHADEIVL IGHSGAGAYL PAIVDAVDEC VIGIAFVDAQ LPRPGLSDFD ASPPDFREAL TAMAQDGMLP PWDRWFPPEV LTELIPQAEQ REAFLSELHP IALAYFQEPA PRTESWSATQ CTYLQLSESY TYQADRAEAL GWPTTRLAAD HLSLVTDPEP VADFLSEFAR TLANS
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