Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5622 |
Symbol | |
ID | 8336982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6481909 |
End bp | 6482703 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644958726 |
Product | protein of unknown function DUF1275 |
Protein accession | YP_003116322 |
Protein GI | 256394758 |
COG category | [S] Function unknown |
COG ID | [COG3619] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.368186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.37363 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTGCCT CCTGGCGCGC CTGCACCGCC CGCGCCCGGG ATCGCGCCAT CCTGATCTCC GTGGCGCGAT TGTGGAAGGT GCCCGGGACC GCGGGGCTGA TGGTGCTGCT CACGGCTGTC GCGGGGTGGG TGGACTCGGT CGCCTACGTG CGCTCCGGCT CGGTGTTCGT CGCGAACCAG ACCGGCAACG CGGTGTTCCT GGCGGTGCAG GTGGCAGAGC GCTGGGTTCC GGGGGTGCAC CCCGCGGGCG TCGTCACCGA GCCCGACACC TACGGGCCCT TCTCCTCGCT GCTCGGCTTC TGCGTCGGCG TCGCGATCGC GGTGCCGCCG CTGCGCCGCT CGCGCCGCGC CGACGACCCC GAAGTCCCCT GGATCCTGCT GGTGATCGAG GCGCTGCTGC TCGCCTCAGT GATCGTGCTC GCCTCCGCGC CGCGTGAACT GCGGCTCGGG GTGGAGGCCG CGGCGATGGG AGTGCAGAGC GCTTACGCCG CCGGGGTCGC GATGCGCGGG GTCTCGACCA CCACGCTCAC CGGCACGCTC GTGACGCTGA TCTCGGCGTT CGCCGAGGAG CCGGGACGCC GCGCGCGCAA AGCCATCGTG CTGCTGACGA CGGTCTGGGC CGCTTACACG ATCGGCGCCT GGGGCGGCGC GGCAGCCGGG CTGTCCTGGT CGATCGGGAC GGTGCACGGT TGCGCCGCCG CGGCCGTGGC GCTCGCGGCG TTCGCCGTGT GGCGGGACCG GCGCACCCGG CAGGACCGGC ACGACCGGCG AGAAAGCCGC CGCCGCCCGG CCTGA
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Protein sequence | MAASWRACTA RARDRAILIS VARLWKVPGT AGLMVLLTAV AGWVDSVAYV RSGSVFVANQ TGNAVFLAVQ VAERWVPGVH PAGVVTEPDT YGPFSSLLGF CVGVAIAVPP LRRSRRADDP EVPWILLVIE ALLLASVIVL ASAPRELRLG VEAAAMGVQS AYAAGVAMRG VSTTTLTGTL VTLISAFAEE PGRRARKAIV LLTTVWAAYT IGAWGGAAAG LSWSIGTVHG CAAAAVALAA FAVWRDRRTR QDRHDRRESR RRPA
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