Gene Caci_5391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5391 
Symbol 
ID8336745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6214728 
End bp6216356 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content71% 
IMG OID644958489 
Producthistidine kinase 
Protein accessionYP_003116091 
Protein GI256394527 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.178617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGGC ACGGCGATCG GCACGGCGGC GGGGACGGGG ACCGGAGTGG GAACGGGAAC 
GGCAGTTGGC TCACGCGGCG GTCGTTCCGA TCCCGGATCA CCCTCCTGGT CGTGGCGGCC
GTCGGCCTCT CGGTCGCCCT CTGCGCGCTG ATCGGCTACC TGGCGATCAG CCGCACGATC
ATGAATCGGA TGGACCACCA GCTCGAGCAG CGCGCGACCG TCTTCACCGC GTGGCCGCTG
GAGATGTTCT CCCCGAGCAA GATCGACCAG GCCCAGACGC TCCTGGCCAG CTCCGGCTAC
CAGGAGTCCC TGGTCTTCGC CGACGGCACC GCGCACGAGC CGCAGAACCT GGAGCTGCAA
CGCCTCGGAC CGCAGGGGCG ACCCGACCAG GTCCTGGCGA CCTATCAGGT GTGGGCTCCC
TTCGGCCAGC CCGAGATCGC CGTCGCCGCC CAGCAGCGCG AGACGTCGCT GCGAACCTTC
AGCTACAACG GCGTGGACTA CCGCGTCTAT GCCATCCGCA ACACCTACGG CGACATGCCG
ACCGACGGCG ACGCCTCTCC GGACGGAACC CCTGCCGCTG ACGGGTCCGC CGACACCTCG
CAATCCTCCC GATCCTCCCG ATCCTCCCAA TCCCCCCAAG CCCCCCAATC CTCGGCCCTC
GTCTTCTCCA CCTCCCTGGC GCCGACCGAA TCGGCCCTGA ACACCATCGC CACCATCTCG
ATCGTCGTCG GCCTGCTCGG CATCGCGCTG GCCACCTGTG CCGGCCTCGC GATCGGCCGC
GCGGCGCTGC GGCCGGTCGT CCGGCTCTCG CAGGCGACCG AATACATCGC CCGCACCGGC
GATCTGGCCC GGCTGCCGGT CAAGGGCGAC GACGAGATCG CGCACCTGAC CCGCAACTTC
AACACCATGC TCGAAGCGCT CGCCCGATCC CGCGAGCACC AAAAGCGCCT CGTCGCCGAC
GCGGGGCACG AACTGCGCAC CCCGCTCACC TCGATCCGCA CCAACCTCGA CCTCCTCGCC
CAGGTCTCGG CCGCGCCCGA CGACGCCCGC CTGCCCGCCG AGGAACGCGT CGCGCTCCTG
AACGACGTGC GCGCGCAGAT GGAAGAGCTC TCCATGCTCA TCTCCGACCT CGTCGAGCTC
TCCCGCGACG ACCAGCCCGC GCAGACCATC GAGCAGCTGA ACCTGCGCGA CGTCGTCGAA
CGCGCCGCCG AGCGCGTGCA GCGCCGCGCG CCCCGCATCA CCTACGACCT GCGCCTGCGA
CCCTGGTACC TCCAAGGCGA CGCCACCGCG CTGGAGCGCC TCGTCACGAA CCTGCTCGAC
AACGCGACCA AGTTCTCCCC GGAGGCCGGA ACCATCACCG TCACCCTCGC CGATGGCCTG
CTGCAAGTGG CAGACCAGGG CCCGGGCATC GCCGAGGAAG ACCTCACGCA CGTCTTCGAA
CGCTTCTACC GCTCGCCGGA AGCCCGCTCC ACCCCGGGCT CCGGACTCGG GCTGGCCATC
GTGCTGCACG TCGCCACGAA CCACGGCGGC GAGGTCGCCG CGGCTCGCGC ACCGGGCGGC
GGGGCGCTGC TCAGCGTGCG GCTGCCGGGC AGCCCGGCGC GCGTCGAGGA GCCCGTGGCC
ACCGCGTGA
 
Protein sequence
MRRHGDRHGG GDGDRSGNGN GSWLTRRSFR SRITLLVVAA VGLSVALCAL IGYLAISRTI 
MNRMDHQLEQ RATVFTAWPL EMFSPSKIDQ AQTLLASSGY QESLVFADGT AHEPQNLELQ
RLGPQGRPDQ VLATYQVWAP FGQPEIAVAA QQRETSLRTF SYNGVDYRVY AIRNTYGDMP
TDGDASPDGT PAADGSADTS QSSRSSRSSQ SPQAPQSSAL VFSTSLAPTE SALNTIATIS
IVVGLLGIAL ATCAGLAIGR AALRPVVRLS QATEYIARTG DLARLPVKGD DEIAHLTRNF
NTMLEALARS REHQKRLVAD AGHELRTPLT SIRTNLDLLA QVSAAPDDAR LPAEERVALL
NDVRAQMEEL SMLISDLVEL SRDDQPAQTI EQLNLRDVVE RAAERVQRRA PRITYDLRLR
PWYLQGDATA LERLVTNLLD NATKFSPEAG TITVTLADGL LQVADQGPGI AEEDLTHVFE
RFYRSPEARS TPGSGLGLAI VLHVATNHGG EVAAARAPGG GALLSVRLPG SPARVEEPVA
TA