Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5288 |
Symbol | |
ID | 8336642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6093143 |
End bp | 6094093 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644958386 |
Product | ribonuclease BN |
Protein accession | YP_003115988 |
Protein GI | 256394424 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.795849 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTCG GCGACCGTAT AAGAGATCTG ACACGCCGCA TCGACGCTTT CCAGCAGCGG CACCCCTGGC TGGCGTTCCC CGCGGCGGTC TGGCGCAAGC TCTCCGACGA CCAGGCCGGC AACCTCACCG GGCTGCTCAC CTTCTACGCC TTCGTCTCCC TGTTCCCGCT GTTGCTGCTG CTGGTGACCG TGCTCGGCAT CGCGCTGCGG CACGACCCGG CGCTGCAGGA CTGGGTCCTG AGATCGGCGC TGGCGGACTT CCCGGTGCTC GGCGACCAGC TGCGGGGCAA CGTCCACGCC CTCGGCCGCG GCGCGACCGG GCTGGTGATC GGGCTCGTCG GCTCGCTGCT CGGCGCGCGC GGGCTGGCCA ACGCCGCGCA GAACGTCCTG AACCGCCTGT GGGCCGTGCC CTACAACCGC CGCCCGGGCT TCCCGTGGTC CTGGCTGCGC AGCTACGCCT TCATCGCCGT CGTCGGCATC GGCATGGCGG CGACCACCCT GGTGGCCGAC CTCTCCTTCG GCATCGGCAG CGGACCGCTG TCGATCGCGG TCCGGGTGGC AGCCCTGTCC GGAGCGGTGG TGATCGGAAC CCTGGCCTAC TGGCTCGCCC TGCGCCTGGC GATCGCCGGC GAGGTGGCCG GGCGGGACCT GTGGACCGGC GCCGTGATCG GAGCCGTGGG CTGGCAGTTC CTGCAGGGCA TCGGCGGCTA CTACATCACC CACCAGCTCC GCCACGCCTC GACGCTGTAC GGGACCTTCG GACTGGTGCT CGGACTCATC GCCTGGCTGT ACCTCCAAGC CCGCGTGACC CTGTACGCCG TCGAGGTCGA CGTGGTCCGC TCGCACAAGC TGTGGCCGCG CAGCCTGTTC CCGCCGCCGA CCACCGAAGG CGACCGGAAG GCGTGGGATT CGGCGATGGC GGCGCAGGAC CGGGCGCCTA CGTCGGATTA A
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Protein sequence | MNLGDRIRDL TRRIDAFQQR HPWLAFPAAV WRKLSDDQAG NLTGLLTFYA FVSLFPLLLL LVTVLGIALR HDPALQDWVL RSALADFPVL GDQLRGNVHA LGRGATGLVI GLVGSLLGAR GLANAAQNVL NRLWAVPYNR RPGFPWSWLR SYAFIAVVGI GMAATTLVAD LSFGIGSGPL SIAVRVAALS GAVVIGTLAY WLALRLAIAG EVAGRDLWTG AVIGAVGWQF LQGIGGYYIT HQLRHASTLY GTFGLVLGLI AWLYLQARVT LYAVEVDVVR SHKLWPRSLF PPPTTEGDRK AWDSAMAAQD RAPTSD
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