Gene Caci_5213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5213 
Symbol 
ID8336567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5990807 
End bp5992078 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content68% 
IMG OID644958311 
Producthypothetical protein 
Protein accessionYP_003115913 
Protein GI256394349 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0312335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGC TTCATCGGGC GCGCACTCGT CTTCGTGCCC TGATCTGTAT TCGTCCGACA 
ATCATCATTC GTACGACAAT CATCGGCGCG GTCCTGGTTC CCGTGCTCGC CGCCACCACG
ACCGTGGTCG GTGTCGGCGC GGCGCACGCG GCGACGCCGG GCGGATCGCC GTGGATCGTC
TCGGTCGGCG ACAGCTACAT CTCCGGGGAG GCCGGACGCT GGGCCGGGAA CACCAACACC
AGCAGCTCGG AGATCGACGC GCTCGGTTCG GCGGCGTACT ACGACAACGC CGGGCACACC
GCCGAGACCA TCCCGCGCTG CCACCGCTCG CAGTCCGCCG AGGTCTACAT CGGCGGCGGG
GTGAACGGGC TGAACCTGGC GTGCAGCGGC GCGGAGACCG CGACCTACAC CGACAGCGGG
AACTTCAAGC CGGGGTTGGA CTTCTACAAC TCCGGCGGCA ACCAGGGACA GGCCCTGATG
CTGCAGAACT TCGCCGCGAG CCACAAGGTG GGCATGGTCG CGGTGTCGAT CGGCGGGAAC
GACTTCAACT TCTCCTCGAT CGTGACCACC TGCGTGGAGG ACTTCCTGAC CACGCCGTCG
TGGTGGCCGT CGTACTGCAG CCAGGACTCC TCGGTCACCG GCAACTTCTC CGCGGCCAAC
GTCGCGGCCG TCACCTCGCA CATCGCGCAG GCGCTGCGGA ACGTGCGCCA GGCGATGACC
AACGCCGGAT ACGCCGACAG CGACTACACG ATCCTGGTGC AGAACTACCC CTCGCCGATC
CCGACCTCCT CGGGCTTCCG CTACTCCCAG TCCGGCTTCA CGCGCCAGTC CACCGGCGGC
TGCGGCTTCT GGAACACGGA CGCGAACTGG GCCGACGGCA CGGCACTGCC GACCATCTCC
GGCGCGGTCT CCAACGCCGT CGCGCAGAGC GGGCTGAGCA ACGTGAAGCA GCTCGACATC
TCCTCGGCGT TCAACGGCCG CCGGCTGTGT GAGAACACTG TCGGCCTGCT GGAGGAGAAG
GGCCTGGGTT CCTGGACGAA CCCCGGCGCG GTCGACAAGA CCGAGTGGGT CAACCAGATC
CGCACGGTCA CCACGATCGG CAGCAGCCCG TACTACATCC AGGAATCGCT GCACCCGAAC
TACTGGGGTC AGCTCGCCCT GCGCAGCTGC GTGCGCCAGG CGTACAACAA CGGCGCGGTG
CGCAGCGGCA GCTGCACGAT CGCCGGGACC GGCCTGGATG GCAACGGCGA CCCGGCCATG
GCGCTGCACT AG
 
Protein sequence
MSRLHRARTR LRALICIRPT IIIRTTIIGA VLVPVLAATT TVVGVGAAHA ATPGGSPWIV 
SVGDSYISGE AGRWAGNTNT SSSEIDALGS AAYYDNAGHT AETIPRCHRS QSAEVYIGGG
VNGLNLACSG AETATYTDSG NFKPGLDFYN SGGNQGQALM LQNFAASHKV GMVAVSIGGN
DFNFSSIVTT CVEDFLTTPS WWPSYCSQDS SVTGNFSAAN VAAVTSHIAQ ALRNVRQAMT
NAGYADSDYT ILVQNYPSPI PTSSGFRYSQ SGFTRQSTGG CGFWNTDANW ADGTALPTIS
GAVSNAVAQS GLSNVKQLDI SSAFNGRRLC ENTVGLLEEK GLGSWTNPGA VDKTEWVNQI
RTVTTIGSSP YYIQESLHPN YWGQLALRSC VRQAYNNGAV RSGSCTIAGT GLDGNGDPAM
ALH