Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5213 |
Symbol | |
ID | 8336567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5990807 |
End bp | 5992078 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644958311 |
Product | hypothetical protein |
Protein accession | YP_003115913 |
Protein GI | 256394349 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0312335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGGC TTCATCGGGC GCGCACTCGT CTTCGTGCCC TGATCTGTAT TCGTCCGACA ATCATCATTC GTACGACAAT CATCGGCGCG GTCCTGGTTC CCGTGCTCGC CGCCACCACG ACCGTGGTCG GTGTCGGCGC GGCGCACGCG GCGACGCCGG GCGGATCGCC GTGGATCGTC TCGGTCGGCG ACAGCTACAT CTCCGGGGAG GCCGGACGCT GGGCCGGGAA CACCAACACC AGCAGCTCGG AGATCGACGC GCTCGGTTCG GCGGCGTACT ACGACAACGC CGGGCACACC GCCGAGACCA TCCCGCGCTG CCACCGCTCG CAGTCCGCCG AGGTCTACAT CGGCGGCGGG GTGAACGGGC TGAACCTGGC GTGCAGCGGC GCGGAGACCG CGACCTACAC CGACAGCGGG AACTTCAAGC CGGGGTTGGA CTTCTACAAC TCCGGCGGCA ACCAGGGACA GGCCCTGATG CTGCAGAACT TCGCCGCGAG CCACAAGGTG GGCATGGTCG CGGTGTCGAT CGGCGGGAAC GACTTCAACT TCTCCTCGAT CGTGACCACC TGCGTGGAGG ACTTCCTGAC CACGCCGTCG TGGTGGCCGT CGTACTGCAG CCAGGACTCC TCGGTCACCG GCAACTTCTC CGCGGCCAAC GTCGCGGCCG TCACCTCGCA CATCGCGCAG GCGCTGCGGA ACGTGCGCCA GGCGATGACC AACGCCGGAT ACGCCGACAG CGACTACACG ATCCTGGTGC AGAACTACCC CTCGCCGATC CCGACCTCCT CGGGCTTCCG CTACTCCCAG TCCGGCTTCA CGCGCCAGTC CACCGGCGGC TGCGGCTTCT GGAACACGGA CGCGAACTGG GCCGACGGCA CGGCACTGCC GACCATCTCC GGCGCGGTCT CCAACGCCGT CGCGCAGAGC GGGCTGAGCA ACGTGAAGCA GCTCGACATC TCCTCGGCGT TCAACGGCCG CCGGCTGTGT GAGAACACTG TCGGCCTGCT GGAGGAGAAG GGCCTGGGTT CCTGGACGAA CCCCGGCGCG GTCGACAAGA CCGAGTGGGT CAACCAGATC CGCACGGTCA CCACGATCGG CAGCAGCCCG TACTACATCC AGGAATCGCT GCACCCGAAC TACTGGGGTC AGCTCGCCCT GCGCAGCTGC GTGCGCCAGG CGTACAACAA CGGCGCGGTG CGCAGCGGCA GCTGCACGAT CGCCGGGACC GGCCTGGATG GCAACGGCGA CCCGGCCATG GCGCTGCACT AG
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Protein sequence | MSRLHRARTR LRALICIRPT IIIRTTIIGA VLVPVLAATT TVVGVGAAHA ATPGGSPWIV SVGDSYISGE AGRWAGNTNT SSSEIDALGS AAYYDNAGHT AETIPRCHRS QSAEVYIGGG VNGLNLACSG AETATYTDSG NFKPGLDFYN SGGNQGQALM LQNFAASHKV GMVAVSIGGN DFNFSSIVTT CVEDFLTTPS WWPSYCSQDS SVTGNFSAAN VAAVTSHIAQ ALRNVRQAMT NAGYADSDYT ILVQNYPSPI PTSSGFRYSQ SGFTRQSTGG CGFWNTDANW ADGTALPTIS GAVSNAVAQS GLSNVKQLDI SSAFNGRRLC ENTVGLLEEK GLGSWTNPGA VDKTEWVNQI RTVTTIGSSP YYIQESLHPN YWGQLALRSC VRQAYNNGAV RSGSCTIAGT GLDGNGDPAM ALH
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