| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5172 |
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| Symbol | |
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| ID | 8336526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5944429 |
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| End bp | 5945316 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644958270 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_003115872 |
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| Protein GI | 256394308 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGC GAACCGAGAC CGTGCGCGGC ACGGGACAGC AGATCGGCTC CCGCCCGAGG
CGTTCGGCGG CTGCGGCGTC GCGCACGGCG CTGGGCGCGC TGATCCTGCG GGACCTGATG
GTGCTCAAGA AGAATTTCTG GGAGTTCGTC GCGCGCACCG TGATCCAGCC GTTCCTGCTG
GTCTTCGTGT TCTTGTACGT CTTCCCCACC ATCGGCCAGG GCATCGGCGG CGGAGGCGGC
ACGCGCAGCG AGTCGGCGTT CGCCACGGTA CTGGTCCCGG GCGTGGTCGG CATCGCGATC
ATGTTCCAGG GCATCCAGGC GGTGGCACTC CAACTGGCGG CGGAGTTCGG CTACACCCGC
GAGATCGAGG ACCGCGTCCA GGCGCCCTGC CCGATCTGGC TGGTCGCGCT GGCGAAGGTC
TTCTCCGGCG CGGTACAGGG CATGATCTCG GCCGTGCTGG TGTTCCCCAT CGCCGCGGTG
GTGCACGCGA AGGGCGTACA CGCGGACCTG TCGTACCACT GGTGGATCCT GCTCACGCTG
CTCCCCCTGG CCTGCGTGGC GATGACCTCG CTCGGGCTGC TCCTGGGCAC CACCTTCGAG
GCGCGCAACA TCGGACTGAT GTTCGGATTC GTGGTACTGC CCCTGACCTT CCTCGGCGGC
ACCTACTACC AGTGGACCCG CCTGGCACCG GTCAAGGTCG GCGGCTTCCC CTGGCTCCAG
ACCCTGGTCC TCATCAACCC CCTGATCTAC ATCAACGAGG GCATGCGCGC GGCCCTGACC
GACGCACCAC ACATGCATCT GTATGTGGTG TACCCGGTAC TGATCGCCTT CCTGGCACTC
TTCCTGGGCT GGGGACTGCG GAACTTCCGG CGCCGGGTGC TCTCGTAA
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| Protein sequence | MAARTETVRG TGQQIGSRPR RSAAAASRTA LGALILRDLM VLKKNFWEFV ARTVIQPFLL
VFVFLYVFPT IGQGIGGGGG TRSESAFATV LVPGVVGIAI MFQGIQAVAL QLAAEFGYTR
EIEDRVQAPC PIWLVALAKV FSGAVQGMIS AVLVFPIAAV VHAKGVHADL SYHWWILLTL
LPLACVAMTS LGLLLGTTFE ARNIGLMFGF VVLPLTFLGG TYYQWTRLAP VKVGGFPWLQ
TLVLINPLIY INEGMRAALT DAPHMHLYVV YPVLIAFLAL FLGWGLRNFR RRVLS
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