Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5121 |
Symbol | |
ID | 8336475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5878563 |
End bp | 5879291 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644958219 |
Product | transcriptional regulator, MerR family |
Protein accession | YP_003115821 |
Protein GI | 256394257 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGACG AGGAATACCG CGTCGACGAC CTCGCGCGCT TGTCCGGGAT GACGGTCCGC AACATCCGCG AGCACCAGTC CCGCGGCCTG CTCCCCGCCC CGACCGTCCG CGGCCGCGTG GGCTACTACG GTCCCGAACA CCTGGCGCGC CTGGAGCAGA TCAAGCGTCT GCAGGCCGAG GGCTTCACCC TGGACTCGAT CCGGCGCATG CTCGGCGGCG GCGCGGAGTT CGCCTCCTTC GCCTCCGCCG TCCACCAGGC CTTCGACGAC GGCGACAAGC GCGTCGTCCG CCTCGGCGAC ATCCACACCC TGTTCCCCGG CCTGGACGAA GGCGACGCCG AGGGCAGCAC CGCCCTCCTG GACCAGGCCG TCGACCTCGG CCTGCTGCGC CCGCTCGGCA ACGGACGCTT CGAGGAGCGC TCCCCGCAGC TGACCCGCAT CGGCGCCGAG CTGATGGCCC TGGGCATCCC CCCGGACAGC GCCCTGAAGG CGGCAGCCGA GGCACGCACG CACGTGCAAG CCGTCGCGAA GTGCTTCGTG CAGCTGTACA TGGACCAGAT CTGGGCACCC TTCGCAGCCG CCGGCCACCC CGCCGATCAG TGGCCTGACA TCCTCAGCGG CCTGGACCGC TTGCGCCCGC TCGCGCTGGA CTCGATGCTG GCGCTGATGC GGATGGCACT GGACGAAGCC GCGACGCAGC TGATCGAGGA GCGCGCCGGG CTGCGGTAG
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Protein sequence | MNDEEYRVDD LARLSGMTVR NIREHQSRGL LPAPTVRGRV GYYGPEHLAR LEQIKRLQAE GFTLDSIRRM LGGGAEFASF ASAVHQAFDD GDKRVVRLGD IHTLFPGLDE GDAEGSTALL DQAVDLGLLR PLGNGRFEER SPQLTRIGAE LMALGIPPDS ALKAAAEART HVQAVAKCFV QLYMDQIWAP FAAAGHPADQ WPDILSGLDR LRPLALDSML ALMRMALDEA ATQLIEERAG LR
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