Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5108 |
Symbol | |
ID | 8336462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5866793 |
End bp | 5867485 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644958206 |
Product | B3/4 domain protein |
Protein accession | YP_003115808 |
Protein GI | 256394244 |
COG category | [S] Function unknown |
COG ID | [COG3382] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.809424 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACTTCC AGCACGCCCC AGCCATCCGG TCCGCCCATC CCGGCCTGGC CGCCACGGCG ATCACCGCCG CCGGCATCAC CGCGGACGCC GACGTCGAGG AACAGGTCGC CCGCTTCACG GCGATCGCGA ACGCCCGGCT CGCCGGCGGC GCCGAATCCG ACCTCGCCGA GATCAAGGCC TGGCGCCAGG CGTTCTCGAC GATGGGACTC AAGCCCACGC AGTACCGCTG CGCCTCCGAA GCCCTGCTGC GCCGCCTGCG CAAGGAAGGC GAACTCCCCC GCATCCACCC GCTGATCGAC CTGTGCAACG CGGTCTCGGT CGCCTTCGCG ATCCCGGTCG CAGCCCTCGA CCTCGACCAG ATCTCCGGCG ACCTCGAAGT CCGCCCCGCC ATCGGCGACG AGGTCTACCA CACCTTCGGC GGCACGACCG AGAACCCCGA GCCGGGCGAG GTGATCTTCG CCGACTCCGA GAACACCTCC CACGCGCGCC GCTGGACCAA CCGGCAGAGC GGGCTGTCGG CGGTGCGCGC GCAGACCTCG CGGGTCCTGA TCGTCGCCGA GGCGCTGCAC GAGTCAGCCG CCGAGGACAT CAGTGCCCTG ATGAAGACGC TGGTCGAGGA GCTGACGGCG GTGTGGCGGG TGACGCCGGT GTCCGCGGTG CTGAGTCAGG AAGCACCGCG GTTCACCGTC TGA
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Protein sequence | MYFQHAPAIR SAHPGLAATA ITAAGITADA DVEEQVARFT AIANARLAGG AESDLAEIKA WRQAFSTMGL KPTQYRCASE ALLRRLRKEG ELPRIHPLID LCNAVSVAFA IPVAALDLDQ ISGDLEVRPA IGDEVYHTFG GTTENPEPGE VIFADSENTS HARRWTNRQS GLSAVRAQTS RVLIVAEALH ESAAEDISAL MKTLVEELTA VWRVTPVSAV LSQEAPRFTV
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