Gene Caci_4341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4341 
Symbol 
ID8335695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4930389 
End bp4931054 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content73% 
IMG OID644957444 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003115046 
Protein GI256393482 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.341994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAAG CTCTCTTCTC CCCCACCGGA TCCAGCCCCG GCGCCCTGCC CTCCCGCACC 
GAGGCCGTCC TGGAAGCGAT CAAGCACGCG ATCCTGACCG GCGAACTCAA GCCGGGCCAG
GCACTGGTCG AGACCGACCT GGCCGGCGAA CTCGGCGTGT CCAAGACCCC CGTCCGCGAA
GCCCTCAAGA CGCTGGCGGG CACCGGGCTG GTCACCATGA GCCCTTACAA GGGCGCCACC
GTCCGCGAGA TCGACCGCGC CCACGCCCGC TCCATATACG ACATGCGCCT CCTGCTGGAG
CCGACCGCCG CGGGCCGCAG CGTCGGCGTC CACCGCGACT GGGCTCCGGC GCGCGCCGCC
CTGGAAGCCG CCGACGAGTC CACCGACGCA GCCGGCCGCT CGCTGGCCAA CCGCGCCTTC
CACCGCCACA TGTACCTCGC CTGCGGCAAC CCGCTGCTCG TGCGCACCCT GGACGACCTG
CGCGACCAGA CGGCCCTGGT CTCGGCGGCG GCGTGGGCGC AGCGGCCTTC CTGGGAGCGC
GAGGCGGCCG AGCACCGGGC GATCCTGGCC GCCGCCGAAA ACGGCGACAC CGAGGAGGTC
AGGGATCTGA TGCGCAGCCA CATCAGCTCC TTCGTGGCCC GGACGTTCCC CGAGGACGAG
ACCTGA
 
Protein sequence
MPEALFSPTG SSPGALPSRT EAVLEAIKHA ILTGELKPGQ ALVETDLAGE LGVSKTPVRE 
ALKTLAGTGL VTMSPYKGAT VREIDRAHAR SIYDMRLLLE PTAAGRSVGV HRDWAPARAA
LEAADESTDA AGRSLANRAF HRHMYLACGN PLLVRTLDDL RDQTALVSAA AWAQRPSWER
EAAEHRAILA AAENGDTEEV RDLMRSHISS FVARTFPEDE T