Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4341 |
Symbol | |
ID | 8335695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4930389 |
End bp | 4931054 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644957444 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003115046 |
Protein GI | 256393482 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.341994 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGAAG CTCTCTTCTC CCCCACCGGA TCCAGCCCCG GCGCCCTGCC CTCCCGCACC GAGGCCGTCC TGGAAGCGAT CAAGCACGCG ATCCTGACCG GCGAACTCAA GCCGGGCCAG GCACTGGTCG AGACCGACCT GGCCGGCGAA CTCGGCGTGT CCAAGACCCC CGTCCGCGAA GCCCTCAAGA CGCTGGCGGG CACCGGGCTG GTCACCATGA GCCCTTACAA GGGCGCCACC GTCCGCGAGA TCGACCGCGC CCACGCCCGC TCCATATACG ACATGCGCCT CCTGCTGGAG CCGACCGCCG CGGGCCGCAG CGTCGGCGTC CACCGCGACT GGGCTCCGGC GCGCGCCGCC CTGGAAGCCG CCGACGAGTC CACCGACGCA GCCGGCCGCT CGCTGGCCAA CCGCGCCTTC CACCGCCACA TGTACCTCGC CTGCGGCAAC CCGCTGCTCG TGCGCACCCT GGACGACCTG CGCGACCAGA CGGCCCTGGT CTCGGCGGCG GCGTGGGCGC AGCGGCCTTC CTGGGAGCGC GAGGCGGCCG AGCACCGGGC GATCCTGGCC GCCGCCGAAA ACGGCGACAC CGAGGAGGTC AGGGATCTGA TGCGCAGCCA CATCAGCTCC TTCGTGGCCC GGACGTTCCC CGAGGACGAG ACCTGA
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Protein sequence | MPEALFSPTG SSPGALPSRT EAVLEAIKHA ILTGELKPGQ ALVETDLAGE LGVSKTPVRE ALKTLAGTGL VTMSPYKGAT VREIDRAHAR SIYDMRLLLE PTAAGRSVGV HRDWAPARAA LEAADESTDA AGRSLANRAF HRHMYLACGN PLLVRTLDDL RDQTALVSAA AWAQRPSWER EAAEHRAILA AAENGDTEEV RDLMRSHISS FVARTFPEDE T
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