Gene Caci_4028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4028 
Symbol 
ID8335381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4559641 
End bp4560498 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID644957134 
Producthypothetical protein 
Protein accessionYP_003114737 
Protein GI256393173 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.335783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00331884 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCTGCA CTCCGGGCAC CGGTTCCTGC ACGATCGATG TCAACAATCC CGGCAACCCA 
GGGACCACAC CCTCGCCGAG CCAGGGCTCC GGTAGCGGCG GAGGATCGGG TGGCTCGAGC
GGTGGTTCGG GAGCGACCTC GACTCCGTCG CCGGAACAGA CCCTGATCAA CGGCGACTGC
ACCTATGCCG CCGACCCGTC GTACGTGCCG CAGCCTGGTA CGGAATCGCA TGCAGGTCAG
AAGGGCGCCT GGTACCTGAT GACCTGCCCG GACGGGATCA AGACCGGCGG CGACCCGAAC
AAGCCGGTCG CCACAACGAC GCAGAAGATG GTGTGGCTGA CGAACCCGCC GCCGGCGGCC
CTGATGCTGC CGACCCCGGC GGCGCTCGCC GATCGAGCGC GGAGTCTGCT GACGCCGCCG
AAGCCGCAGA TCGGCTCTAA CCCGCCCGTT GGGAGCCCGC AGATGGTCGG AGTCCCAACC
TGGGCGTTCC TTTCCCGCAG TCTGTGGGTC CCAGTATCCG CGAAGGCGGA GGTGCCGGGT
GAGTCGGTGA CGGCCACAGC GACGCCGGTC TCGGTGGCCT GGGACTTCGG AGACGGCAAG
TCGATCGTAT GTACTGGCCC GGGGTCGCAG TTCCCGCCGG GCGCCGATCC GAAGGCATCC
TCGCCGGACT GTGGCCACAC CTACCGGATC TCCTCGGGTA ACGCGCCGGG CGGGAAGTTC
CAGGTCACGG CGACCATCAT CTGGCGCGTC GACTGGGTCG GCGGGGGTCA GGCTGGAACG
CTGAACGACC TGACGACCAC GGCGACGGTC CCGGTCACGG TGAATCAGTC GCAGGCGATC
GTTACCGGCA CCGGGTAG
 
Protein sequence
MTCTPGTGSC TIDVNNPGNP GTTPSPSQGS GSGGGSGGSS GGSGATSTPS PEQTLINGDC 
TYAADPSYVP QPGTESHAGQ KGAWYLMTCP DGIKTGGDPN KPVATTTQKM VWLTNPPPAA
LMLPTPAALA DRARSLLTPP KPQIGSNPPV GSPQMVGVPT WAFLSRSLWV PVSAKAEVPG
ESVTATATPV SVAWDFGDGK SIVCTGPGSQ FPPGADPKAS SPDCGHTYRI SSGNAPGGKF
QVTATIIWRV DWVGGGQAGT LNDLTTTATV PVTVNQSQAI VTGTG