| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3830 |
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| Symbol | |
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| ID | 8335183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4334106 |
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| End bp | 4336235 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644956967 |
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| Product | WD-40 repeat protein |
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| Protein accession | YP_003114570 |
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| Protein GI | 256393006 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.171146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.119084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCGA ACTCTGAGGC CGGCGCCCCG GACCGTTCGC GTTCGGTGGC CCTCCTGGTC
GGCGCGTCCA TCTTCCGGGA CGCCGCGAGC GGGGTCGAGA ACCCGAATCT GAAACCGCTT
CCCACTGCGG CCAACAGCCT CGACGTGATG GAGAAGCTGC TCAAGAGCGA CCAGTACGGC
GGCTGGCCGA CGGACCGTGT TCACGTGTTT CACAACCCGA CCAGCAGTCG GGATCTGCTC
ATCGAGATCG ACTCGGTCCT CACCCGGCAC GACGGGGAGG TCAATGACAC CGTGCTGTTC
TATTACGTCG GCCACGGGTT GCTCATCGAC GGCGGCAGCC AGTTGGGGAT GGCCCTGAGC
GGGACGACGG CGTCCAGCGC GACGCACAAG ATCTCCTCGC TGCTGCCCGC CAGTGTGCGC
GAGGTGCTGG CCAGATTCCA GTACAGGACA ACAATCGAGA TCCTGGACTG TTGCTATGCC
GGCACCGCGA CGAACATCCT CAGTAGTACC GGAGACCTCG CCAAACAAGT CGACCGTGCG
GCGGCAGCGG ACGCGAAGGG CCACTACATC CTGACCGCGT CACGCCACAA CGAGACGGCG
CTCTATACCC TCGGCGACAA CGGACTCACC TATTTCACCG GTTTCCTCAA GGAGGTCCTC
AGTGAGGGGA ACCGGGAAGC AGGGCGCTGG CTCACCATGG ACGATGTCCA CGATGGTCTG
GTCAAGCGCT TCAAACGAAT CAGCGACGGA CACCTCGGCC GTCCCGAGCC GACCAAAGCC
AGCTTCGACC TGGCTGACCG TTTCAAGTTC GCGCGCAACA CGGCCTTCCG GGGCGACGGC
ACCGGCCCGG ACGAAGACGA AACGGATCCA GGCCGGACCA GCCCCAGCCC GGAGGCGAAT
CCGCAATGGT CCCGCCGCGC GGTGCTCACC GCCGCGGCGA GCACGACGTT GGCCGGCGTC
GCCGCGTTCG CCACATGGAC GTATGAAGAA CGGCGTCCTC CCGTCCCGGG CACCGTGCAA
GACGCAGGGA GATCGAGCAC GCCGTCGACG ACTCCACACC CCAGTACGGC GGGCACAGGC
GGACCGGGCA CCACGGGCAG CACAGGTGGC ACACCTTCGG GCACGCCTAC GACCACGACC
GCCGCCCCGC ACCACTTCAC CCAGGCCGTC CCGGTCGCCG GATCACCCCT CACCCTCGGG
GGTCCCCAAG CGCTGGCCGC CACGTTCAGC CGAACCGGCC GGAACCTTCT GGCCGTCTCG
GACCAGAACG GCGCCGTCGT GGTGTGGGAC GCCGACGACT TCACCCAGCT CAAGCAGATC
GGCAGTCGCT TCAGCGCGAA AGGGCCCGCA TACGGCGTCT ACTCGCTGGC CTTCAGTCCG
CTGCCCGGTC GGCAGATCCT GGCCGCCGGG ACCAGCGGTG GCCAGATCCT GCTGTGGGAC
CTGGCCGGAC CGACGACGCC GCGCCTCCTC AAAGAGGTGA GCAGCGGTTC AGGCGACGGC
TGTTCGGTCG CCTTCAGCAC CGACGGGAGC ATGCTCGCCT CGGCTTCGCA ACAGGGCTTC
GTCTCGCTCT GGGTCACCGG CGACCCGGAC AACGTCTACA GCGCGGGATC GGACATCACC
GGCCATGACG GAGCGGTCAA CACAGCCGTG TTCAGCCCGC ACCCATACCT CGTAGCCAGC
GGCGGCTACG ACGACACCGT CCGCTTGTGG GACATCAGCG ACCCCTCGCT TCCGCGCCAG
CTGAGCTTGA TCAAGGGCGC GGACGGCCCG GTACGGTCAC TCGCCTTCAG CCCGGACGGC
AGAACTCTGG CCGCCGGCAA GCAAAGCGGG ATCGTCCGAC TCTACGGCGT GACGACACCG
AGCGCGCCGA AGATGCTCGA CCCGCTGCCA CAGTCTCAGA AGAACTGGGT CAACGCGCTC
GCTTTCAACC AGGATTCGTT GCTCGCGTGT GCCAGTGCGG ACGGGTCTGT CCAGCTTTAC
GACCTGACAG ATCCGGTCCA CCCCCGCGAG ATCCAGCGGG ACCTGGCCGC GTTCCAGGAC
CAGGCTTCGA GTGTGGCCTT CACCGCGGAC GGCCGGGGCT TGGCGGCCGG CTGTGTCAAT
TCCACCATCG ACCTGTGGCG GTTGTCGTGA
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| Protein sequence | MTPNSEAGAP DRSRSVALLV GASIFRDAAS GVENPNLKPL PTAANSLDVM EKLLKSDQYG
GWPTDRVHVF HNPTSSRDLL IEIDSVLTRH DGEVNDTVLF YYVGHGLLID GGSQLGMALS
GTTASSATHK ISSLLPASVR EVLARFQYRT TIEILDCCYA GTATNILSST GDLAKQVDRA
AAADAKGHYI LTASRHNETA LYTLGDNGLT YFTGFLKEVL SEGNREAGRW LTMDDVHDGL
VKRFKRISDG HLGRPEPTKA SFDLADRFKF ARNTAFRGDG TGPDEDETDP GRTSPSPEAN
PQWSRRAVLT AAASTTLAGV AAFATWTYEE RRPPVPGTVQ DAGRSSTPST TPHPSTAGTG
GPGTTGSTGG TPSGTPTTTT AAPHHFTQAV PVAGSPLTLG GPQALAATFS RTGRNLLAVS
DQNGAVVVWD ADDFTQLKQI GSRFSAKGPA YGVYSLAFSP LPGRQILAAG TSGGQILLWD
LAGPTTPRLL KEVSSGSGDG CSVAFSTDGS MLASASQQGF VSLWVTGDPD NVYSAGSDIT
GHDGAVNTAV FSPHPYLVAS GGYDDTVRLW DISDPSLPRQ LSLIKGADGP VRSLAFSPDG
RTLAAGKQSG IVRLYGVTTP SAPKMLDPLP QSQKNWVNAL AFNQDSLLAC ASADGSVQLY
DLTDPVHPRE IQRDLAAFQD QASSVAFTAD GRGLAAGCVN STIDLWRLS
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