| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3698 |
|---|
| Symbol | |
|---|
| ID | 8335051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 4146157 |
|---|
| End bp | 4147470 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644956838 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_003114441 |
|---|
| Protein GI | 256392877 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.343757 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGATC TTCCAAAGTC CCTCTCCGGC AGTTTCCTGA CAGAGCCGTT CTCCGCCGCG
CAGGCCGTGG AGCTGTATCT GCATCTCCAC CGCGACCCGG AACTGTCGGG CGCCGAGGAG
CGCACCGCCG CCCGCCTGGC CCGTGCCCTG ACCGGTGACG GCTTCGAGGT CGCCAGCGGC
GTCGGCGGCC ATGGCGTGGT CGGGGTTCTG CGCAACGGAT CCGGTCCCAC GGTCATGCTC
CGCGCGGAAC TCGACGCGCT CCCCGTCCGC GAGCAGACCG CTCTGCCGTA TGCGAGCACT
GCGACGGCGC TCGACGCCGA GGGTCGCCTG GTCCCGGTGA TGCACGCCTG CGGTCACGAC
CTGCACGTGG CGTGTGCGGC GGGCGCCGCG ACCGTGCTGG CTCAGCGTCG CGACCGTTGG
CGCGGCACCC TGATGGTCGT CGGCCAGCCG GCCGAGGAGA CCCTGACCGG CGCCGCCGCG
ATGCTCGAAG ACGGGCTCTA CGAACGCTTC GCCCCCGGCC CGCCGGACGC CGTGCTGGCA
CAGCACTCGG CACCGCTCCC CGCCGGCATG ACGGCCCACC CGACCGGCGC CGCGACCGCC
GCCGGCGCCG CCCTGCGCGT GGTCGTCCAC GGCCGCGGCG GCCACGCCGC CACCCCCCAC
CTGGCCATCG ACCCCGTGCG GGTCGCCGCA GCGATCGTGC TCCGCCTGGC AACGGTCGCC
GACGAAGAAC TCGGCACCGC CGCCCCCGCC GCAGTCTCCG TTGGATCACT CCACGCAGGC
ACGTCACCCA ACGTCATCCC GGACGAGGCA CACATCGAGG CGACAATCCG CACCCTCACC
GACCCCCACC TGGAACGCCT ACTCGCCGCA GTACACAGAA TCATCGCCGC CGAAAGCGAA
GCAGCAGGCT GCCCCGAACC CCCCGCCGTG ACCCTGCTCA GCAGAACCCC GGCGAACCAC
CCCGACCCAA CCCTGGCAGC CGCCATCATC CGCGCACACC GCCACCTCCT GGGAACCGAA
CGCGTCGCCC TCTGGCCCCC CACCCTGGCC ACCGAGGACT TCCCCCTCTT CGGCCCACCC
GGCGCCGCCA CCGGCCTCCA CAAATCCCCC GCCACCCGCA CCGCCTACTG GATGTTCGGC
ACCATCGGCC CCACCCAATG GCACCAAACC CCCGGCCACA CCGCCGCCGA AAAACTAGCC
ACCCTAGCCC CCAACCACTC ACCCAAGTAC CAACCAGACC CAGGCCCAGC CATCCCCGCC
GGCATCCGCA CCCTGGCCTC AGCAGCCCTC GCCGCCGGCC TCGCCGAGCC CTGA
|
|---|
| Protein sequence | MRDLPKSLSG SFLTEPFSAA QAVELYLHLH RDPELSGAEE RTAARLARAL TGDGFEVASG
VGGHGVVGVL RNGSGPTVML RAELDALPVR EQTALPYAST ATALDAEGRL VPVMHACGHD
LHVACAAGAA TVLAQRRDRW RGTLMVVGQP AEETLTGAAA MLEDGLYERF APGPPDAVLA
QHSAPLPAGM TAHPTGAATA AGAALRVVVH GRGGHAATPH LAIDPVRVAA AIVLRLATVA
DEELGTAAPA AVSVGSLHAG TSPNVIPDEA HIEATIRTLT DPHLERLLAA VHRIIAAESE
AAGCPEPPAV TLLSRTPANH PDPTLAAAII RAHRHLLGTE RVALWPPTLA TEDFPLFGPP
GAATGLHKSP ATRTAYWMFG TIGPTQWHQT PGHTAAEKLA TLAPNHSPKY QPDPGPAIPA
GIRTLASAAL AAGLAEP
|
|---|
| |