Gene Caci_2570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2570 
Symbol 
ID8333919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2910946 
End bp2912661 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content66% 
IMG OID644955723 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_003113329 
Protein GI256391765 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTCA CGCGACGTCT CTGGGCAGTT CTCACTTTCG CAGCGCTCGT AGTGGCCGGT 
ATCGCACCCG CTGCCTCTGC CGGCACGGCG TCCCCGAATA GCACGGCGTC CCCCAATAAC
TCGGCGTCCC CCAATACCGC GCCTCAGTAC CGGTTCTCCA CGTACAACAT CTGCGGCAAC
CACTGTTCAT CGAGCGACTA CAGCAACACA CAGCGCCTGA GAGTTGTCGA GGACGAGGGA
TCCCCGACCG GCGGGAACGC CGACGACATC TTTCTCCAGG AGGTCTGCAA GTCCCAGTTC
GACAGCATCG ACGCGCAGTT GAGGACGCGG GGCTACACAG GGCTCTTCGA CCAGACCAAA
GCTGTGGGCT CGGGCACCTG CAGCGGCAGC CCATACGGCA TCGCCATGTT CACGAAGGGC
GCCGTCGTCC AGACGAAAGT CCTCCACCTG AAGATCGGCG GGGAGCCCAC GGACGAGGAC
ATCGCGTCGC CGTGTGTGGA GAGCTTCATC CAGGGTCGGC TCCACTGGGG CTGCTCGGTG
CACCTGTACT GGGACTCCAG CACCTACTCC GCGCTTGAGG CGCAGAAGCT GGCGAGTCTC
GTGCGGCCCT GGCAGGAGGC GGGAATCCCC GTCGTGCTCG GCGGCGACTT CAACGCCTCG
GCGACGACGT CGACCCTCGA CTCCTTCTAC CAGCCCGGAA TGGCCGGCAG TCCGCACGGA
AGCTTCCGCG AAGCCGATCA GACAGACAAG AACTACTTCA ACACGTCGAT CTGCACGGCG
ACGCAGTCGG ACTGCCGATC CGGCGAACCG ACGTACGTCG ACCTGACGTC TCAGGCCACG
AAGAAGATCG ACTATCTGTT CTTCAGCCAG AACGCCTTCA CGAACGTCTC CGGAGACGTG
CTGGCGCGTG ACGTGACGGT CTCCGACCAC CGCCTCTACC GCGGTACGGC GACCATGACC
AGCGCCTCGA TGGGGGAGAC CACCGACGTC GGGGACCGCA ACGGCGACGG CGTCGACGAT
TTCGTGGCGG TCGAGCGCTC CACCGGCGAC CTGTACCTCT ACACCAGCTC CGCCTACTCC
GGGGCGAACC GGACGCAGCT CGGCTGGAGC TGGGACACGA TGCGCGATCT GGTCGACGTC
GGCGACCACA ACGGCGACGG CATCGCCGAC CTGATCGCCG TCGACACCGC CGACGACCAC
ATGTACCTGT ACTCCGGTCC CGGCTTCTCG GGCACGACCC GCGTCGACCT CGGCGGCGGC
TGGGACAGCT ACACCGACCT GGCCACCGTC GGGGACCGCA ACGGCGACGG CGTTCCGGAC
TTCGTCGCCA CCGACGCCGC CACCGGCAAT CTCTACCTCT ACACGAGTCC TAACTACCTG
GGCAGCCAGC GCCAGCAGAT CGGCACCGGC TGGACCGGGA CCCGCGACAT CACCGATGTC
GGCGACCACA ACGGCGACGG CCAGGACGAC TTCGTGGCCG TCAACGACAC CGACACCACG
ATGTATCTGT ACTCCAGCCC CGGTTTCACG GGCTCCACCC GGGTCGCGCT GGGCGGCGGC
TGGGGCGGGT ACGGCGACAT CGCCGCGATC GGCCGGCAGA ACTCTGACAA GCAGGCGGAC
TTCGTCGCCA CCGACACCAG CACCGGAAGC CTCTACCTCT ACACGAGTCC GAGCTACCTC
GGCAGCCAGC GCCAACAGAT CGGCAGCGGC TGGTAG
 
Protein sequence
MSLTRRLWAV LTFAALVVAG IAPAASAGTA SPNSTASPNN SASPNTAPQY RFSTYNICGN 
HCSSSDYSNT QRLRVVEDEG SPTGGNADDI FLQEVCKSQF DSIDAQLRTR GYTGLFDQTK
AVGSGTCSGS PYGIAMFTKG AVVQTKVLHL KIGGEPTDED IASPCVESFI QGRLHWGCSV
HLYWDSSTYS ALEAQKLASL VRPWQEAGIP VVLGGDFNAS ATTSTLDSFY QPGMAGSPHG
SFREADQTDK NYFNTSICTA TQSDCRSGEP TYVDLTSQAT KKIDYLFFSQ NAFTNVSGDV
LARDVTVSDH RLYRGTATMT SASMGETTDV GDRNGDGVDD FVAVERSTGD LYLYTSSAYS
GANRTQLGWS WDTMRDLVDV GDHNGDGIAD LIAVDTADDH MYLYSGPGFS GTTRVDLGGG
WDSYTDLATV GDRNGDGVPD FVATDAATGN LYLYTSPNYL GSQRQQIGTG WTGTRDITDV
GDHNGDGQDD FVAVNDTDTT MYLYSSPGFT GSTRVALGGG WGGYGDIAAI GRQNSDKQAD
FVATDTSTGS LYLYTSPSYL GSQRQQIGSG W