Gene Caci_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2421 
Symbol 
ID8333770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2738834 
End bp2740126 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content74% 
IMG OID644955574 
Productbeta-lactamase domain protein 
Protein accessionYP_003113180 
Protein GI256391616 
COG category[R] General function prediction only 
COG ID[COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAA CCGTCGAGTT CTGGGGCGGG GTCGGCGTGA TCGGCTCCAG CAAGGTCCTG 
ATCACCGAGG GCGACCACCG CGTCCTGCTC GATTTCGGGC TCGACATCCC CCGCGGCACC
GACCTGTTCC GCCCGCCGGT CGTGCCCCGG CCGCACCGCT ACCTCGCCGA CCGGCTGCGG
GTCGGCGCGG CGCCGCGGCT GCCCGGGGTC TACGACCCGG CGATGCTCGA GCCGGGGGAC
CCCTTGGCGC AGGACGGCCC GGCCACGGCG GTGTTCGTCA GCCACGCGCA CATCGACCAC
TGCGGGCTCG TCGGAGCCCT GCGGCCCGGT ATCGAGGTCC ACGCCGCCCC GGAGACCGTC
GCGGTGATGC GGGCGCTGAC CGCCGCCGGG GACGGCCTGC CCGGCGGCGA CCCGGACTGG
CGCCCGCTGG CCGAGGAGGA GTCGGCGTGC TTCGGCCCGC TGACCGTCGA GCGCGTCACG
GTCGACCACG ACGTGCCCGG TGCCAGCGGC TACCTGGTGA CCACCTCCGA CGGCGTGCTG
GCCTTCACCG GCGACATCCG GTTCCACGGC CGCGCGCCGG AGCGCGCCTG GCGCCTGGCC
GAGCGCGCAG CCGGTTGTGA GATGTTCGTC ACAGAGGGCA CGGCGCTGGG TCTGCCGGTG
TTCCCCGGCC CGGTCCGCAC CGAGCAGGAC GTCGTCCGGG ACTTCGCCGC GGCGTTGGAG
GAGGCGCGCG GGGACCTGGT GCTGCTGGCG ATGTACCCGC GTGACCTGGA GCGGGTCGCG
GAGTTCATCG AGGTCGCCGG CGCCGCCGGA CGGAAGATCG TCTGGGGCGA GGCGGTCGCG
GTGTTCCTGC GGGAACTAGG CGTCCAGGAC GTGCTCGCCT TCTCCGAGGT CGGGCTGCAG
GCGCTCAAGG ACGACCCGGG AGGCTTCGTC TACCAGCCGG ATCTGCGCGA CCTGCGCGGC
ATCCCGGACC TGGCGGACCT GCCGGTCGGA GAGCGGACGG TGTGGCTGCA CGCCAACGGC
GAGCCGCTGG GACCGTTCGA GTCGCGCTGG CCGCTGTTCA CGGAGTGGCT GGACGTCCTG
GGCATCCCGC TGCGCCGGAT CGGCTCGTTC GGCCACGCCA CCGCCGATGA CCTGCACACA
CTGGTGCACC GCGTCGCGCC GCGGACCGTG GTGCCGATCC ACACCGACGC CCCGGAGCGG
CTGCACCCGG TGGCCGGTCC GGTCCGGCTG CTGCCGGTCC TCGCTCAGTC CTACGACCTA
GGTGGTCACC CGATCGAGCG AACGCCAAAA TGA
 
Protein sequence
MAATVEFWGG VGVIGSSKVL ITEGDHRVLL DFGLDIPRGT DLFRPPVVPR PHRYLADRLR 
VGAAPRLPGV YDPAMLEPGD PLAQDGPATA VFVSHAHIDH CGLVGALRPG IEVHAAPETV
AVMRALTAAG DGLPGGDPDW RPLAEEESAC FGPLTVERVT VDHDVPGASG YLVTTSDGVL
AFTGDIRFHG RAPERAWRLA ERAAGCEMFV TEGTALGLPV FPGPVRTEQD VVRDFAAALE
EARGDLVLLA MYPRDLERVA EFIEVAGAAG RKIVWGEAVA VFLRELGVQD VLAFSEVGLQ
ALKDDPGGFV YQPDLRDLRG IPDLADLPVG ERTVWLHANG EPLGPFESRW PLFTEWLDVL
GIPLRRIGSF GHATADDLHT LVHRVAPRTV VPIHTDAPER LHPVAGPVRL LPVLAQSYDL
GGHPIERTPK