Gene Caci_2341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2341 
Symbol 
ID8333690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2656887 
End bp2657567 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content76% 
IMG OID644955494 
ProductGntR domain protein 
Protein accessionYP_003113100 
Protein GI256391536 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTGC GATCGATCCA GCCCAGCCCG CTCGTGGAGC AGGCCGCCGA GCAGCTGCGC 
GAGCAGATCA CCGGCGGGGC GTGGCCGGTC GGGACCAAGC TGCCCGGCGA GACCACGCTG
GCCGCCTCCC TCGGCGTCGG CCGCTCCACG GTCCGCGAGG CGATCCGCGC CCTGGCCGGG
GAGGGACTGC TCCAGCCGCG GCAGGGCGCC GGGGTGTTCG TGCTGGCCAC CGAGTCCCGG
ACCGATCTGG CCGACCACCT GCGCAAGGCC TCGCTGGCCG ACCTCTACGA GGTCCGGATG
ATGATCGAGA CCCGCGCCGC GCGCCTGGCC GCCGAGCGCC GGACCCCGGC CGACGCCGCC
GCGCTGGAGG CCGCCCTGGA GCGCCGGACC CGGGCCGCGC GCCGCTCGGA CGAGGAGTTC
ATCGAGGCCG ACATCGCCCT GCACACCGCG GTCGTGGCGG CGGCGGGGAA CCCGGTGCTC
ACCGCGTTGT TCGAGCAGTT CGTCCCGACG CTGCGGGAGA CCCTGACCGC GCTGGTCCGC
TCCAGCGGGC GCGCCGATGA GAACCTCGGG CACCGCGCGC ACGCCGCGCT CGTCGCCGCG
GTCGCCGAGG GCAACCCGGA CCGCGCCGAG ACCGTGGTCG CCGAGGAGAT CGCCTCGACC
ACGCTGCGCC GGATCCCGTG A
 
Protein sequence
MSLRSIQPSP LVEQAAEQLR EQITGGAWPV GTKLPGETTL AASLGVGRST VREAIRALAG 
EGLLQPRQGA GVFVLATESR TDLADHLRKA SLADLYEVRM MIETRAARLA AERRTPADAA
ALEAALERRT RAARRSDEEF IEADIALHTA VVAAAGNPVL TALFEQFVPT LRETLTALVR
SSGRADENLG HRAHAALVAA VAEGNPDRAE TVVAEEIAST TLRRIP