Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2341 |
Symbol | |
ID | 8333690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2656887 |
End bp | 2657567 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644955494 |
Product | GntR domain protein |
Protein accession | YP_003113100 |
Protein GI | 256391536 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCTGC GATCGATCCA GCCCAGCCCG CTCGTGGAGC AGGCCGCCGA GCAGCTGCGC GAGCAGATCA CCGGCGGGGC GTGGCCGGTC GGGACCAAGC TGCCCGGCGA GACCACGCTG GCCGCCTCCC TCGGCGTCGG CCGCTCCACG GTCCGCGAGG CGATCCGCGC CCTGGCCGGG GAGGGACTGC TCCAGCCGCG GCAGGGCGCC GGGGTGTTCG TGCTGGCCAC CGAGTCCCGG ACCGATCTGG CCGACCACCT GCGCAAGGCC TCGCTGGCCG ACCTCTACGA GGTCCGGATG ATGATCGAGA CCCGCGCCGC GCGCCTGGCC GCCGAGCGCC GGACCCCGGC CGACGCCGCC GCGCTGGAGG CCGCCCTGGA GCGCCGGACC CGGGCCGCGC GCCGCTCGGA CGAGGAGTTC ATCGAGGCCG ACATCGCCCT GCACACCGCG GTCGTGGCGG CGGCGGGGAA CCCGGTGCTC ACCGCGTTGT TCGAGCAGTT CGTCCCGACG CTGCGGGAGA CCCTGACCGC GCTGGTCCGC TCCAGCGGGC GCGCCGATGA GAACCTCGGG CACCGCGCGC ACGCCGCGCT CGTCGCCGCG GTCGCCGAGG GCAACCCGGA CCGCGCCGAG ACCGTGGTCG CCGAGGAGAT CGCCTCGACC ACGCTGCGCC GGATCCCGTG A
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Protein sequence | MSLRSIQPSP LVEQAAEQLR EQITGGAWPV GTKLPGETTL AASLGVGRST VREAIRALAG EGLLQPRQGA GVFVLATESR TDLADHLRKA SLADLYEVRM MIETRAARLA AERRTPADAA ALEAALERRT RAARRSDEEF IEADIALHTA VVAAAGNPVL TALFEQFVPT LRETLTALVR SSGRADENLG HRAHAALVAA VAEGNPDRAE TVVAEEIAST TLRRIP
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