Gene Caci_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2163 
Symbol 
ID8333508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2454681 
End bp2456003 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content72% 
IMG OID644955313 
Productvon Willebrand factor type A 
Protein accessionYP_003112923 
Protein GI256391359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.820546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGT ACCCGGACTT CGCCTTCGAG ATCAACCAGA ACGAGTTCCT GGCCGCCGGC 
GTGCGCGAGG TGCACGCGGT GGTCACGCTG ACCGCCACCG CGGCGGCCGG CGGCGCTCCG
GCCGCGGCCT CCTACGGCGC CCCGGCTTCG GGATCGGAGA ACGTCGAGGT CATCATCATC
GACTGCTCGG GGTCCATGGA CTACCCGCGC ACCAAGATGA TGGCCGCCAA GGAGGCGACC
AAGGTCGCCA TCGACACCCT GACCGACGGC GCCTTCTTCG CGGTGGTCGC CGGCACCGAG
GGCGCGCGCG TGGTCTACCC GACCGGCGGG CAGCTGCTGC GCGCCGACTA CCAGAGCCGC
GCGGCGGCCA AGGAGGCCGT CGGGCGCCTG CACGCCAACG GCGGCACCGC GATGGGCCGC
TGGCTGGCCC AGGCCGGCCG GATCTTCGAC ACCGCCCCGA GCGCCATCAA GCACGCGATC
CTGCTCACCG ACGGCAAGGA CGAGTCCGAG ACCCCGGCGG ATCTGGCGCG CGCGATCCAG
TCCAGCATCG GCAACTTCAC CGCCGACTGC CGCGGCATCG GCGAGGACTG GGAGCCCAAG
GAACTGCGCA AGATCGCCGA CGCCCTGCTG GGCACCGTGG GCATCATCCG CGACCCGGCC
ACACTGGCCG AGGACTTCCG CGAGATGACC GCGAAGTCCA TGGGCAAGGA GGTCGCCGAC
GTCGCGCTGC GGCTGTGGGC GCCCAAGGGC GCGACGATCC GCTACGTCAA GCAGGTCAGC
CCGAACCTGG CCGACCTGTC CGGGATGCGC GTGCCCGGCG ACAACCCGCT CACCGGCGAC
TACCCGACCG GCGCGTGGGG CGCGGAGAGC CGCGAGTACC ACATCTGCGT CGAGGTCGAG
CCGGGCAACA TCGGCCAGGA GAAGCTGGCC GGCCGGGTGC AGCTGGTGGC CAAGGACGCC
GGCGGCGCCA CGCTGCTGGG CGAGGGCAAG ATCCGCGCGG TGTGGACCGA GGACACGGAT
CTGTCCACGC GCATCAACGG CCGGGTCGCG CACTACACCG GCCAGGCCGA GATGGCCGCG
GCCATCCAGG AGGGTCTGGA CGCCCAGGCC GCCGGCGACC TGGACACCGC CACCGCGCGC
CTGGGGCGCG CCATGGACCT GGCGGTGGAG TCCGGGCACG AGGACACCGT GAAGATGCTG
CGCAAGGTGA CCGAGGTGGA CCCGGCCACG TCCAAGGTGC GGGCCAAGGC CAAGGTGGAC
AAGGGCGACG CGATGGAGCT CGACGTGGTG TCGACCAAGA CCGTGCGCGC CAAGCGGAAC
TGA
 
Protein sequence
MSQYPDFAFE INQNEFLAAG VREVHAVVTL TATAAAGGAP AAASYGAPAS GSENVEVIII 
DCSGSMDYPR TKMMAAKEAT KVAIDTLTDG AFFAVVAGTE GARVVYPTGG QLLRADYQSR
AAAKEAVGRL HANGGTAMGR WLAQAGRIFD TAPSAIKHAI LLTDGKDESE TPADLARAIQ
SSIGNFTADC RGIGEDWEPK ELRKIADALL GTVGIIRDPA TLAEDFREMT AKSMGKEVAD
VALRLWAPKG ATIRYVKQVS PNLADLSGMR VPGDNPLTGD YPTGAWGAES REYHICVEVE
PGNIGQEKLA GRVQLVAKDA GGATLLGEGK IRAVWTEDTD LSTRINGRVA HYTGQAEMAA
AIQEGLDAQA AGDLDTATAR LGRAMDLAVE SGHEDTVKML RKVTEVDPAT SKVRAKAKVD
KGDAMELDVV STKTVRAKRN