| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2027 |
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| Symbol | |
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| ID | 8333371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2294095 |
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| End bp | 2296293 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644955177 |
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| Product | glycoside hydrolase family 37 |
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| Protein accession | YP_003112788 |
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| Protein GI | 256391224 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.203835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGTT CGCTGCGGAC CCTGGCCGTG CTGGCGCTCG GCGTGGGTCT CGTGCTTCCC
GTGACGGCTG CGCGCGCCGC GCCGTCGTCG CGCTCCTCCG CGCCGCCGGG GTCGTCCTCG
GGGTCGGCAT CCCCGGCTTC GTTCGCCAAT GTGCTGGATC TGCAAGGCGT GCCGAGCGTG
GCGCTGCCCG GGGATCCGGC GACCGACGTC AACCCGATCG GCGTGTTCGC CGATCGGGGC
GCCTGGCACG CCTACGCGCT GCCGAAGGTC GGCGACACGG CTTCCTACGG CGCCTTCACC
GGGCCGCTGT ATATCGCGCA GGAGTATCCG TGGTGGCTGA GCAAGGGAAT CAGCCACCTG
ACGCTTTCCG AGGGCGGGCG TCCGATCGAC CTGGCCTCGG CGACGCATCC GGTGTTCACG
TCGCTGCCGG GCATGCTGCA GCAGAGCTTT GACGTGGACG GTCTGCACGT GGTGATGCAG
CTGCGCTACG CCAGCGACCG GACCGCGCTG GTCCAGGCGT TCGTGGAGAA CACCAGCGGC
CGCTCCCGGA AGGTCGGCGC GGGCTGGACC GGATCGCTGC TGCGTCCGGA CACCAAGCCG
ATGAAGAGCG CTCCCTCGCT GCACGCGACG TCCACCGGCA TCTCGGTGGG CTTCGCGAAG
GTGCGGCAGA CGTGGGACTA CCTGACCGAC GGGACCGAGA AGTTCCAGGT GACGCACGCC
GAGCCGGTGA CCACGTCGGT CGCGGGGGAC GCCTACACGA CCGCGCTGAA CGCGCCGCTG
AAGCTCGGCC CGCATGGCGG GCAGACGCTG ACCTGGACCG AGTCCTACAC CTTCACCGGC
GCCGACTACG CCGCCGAGCA GCCGGTGATC GCCAAGACGC TGCGCTCGCC CGGCTCGGTC
GTCGCCGCCG ACGACCGGCG CTGGCGCGGG TACGTGGCCT CCGCCGTGCG CGGCGTCCCG
GCCTCGCGGC AGGCGCTGGC GGTGAAGTCG GTGGAGACGC TGACCACGAA CTGGCGCAGC
GCCGCCGGGG CGTTGCGGCA CGACGGGATC ACGCCGTCGA TCTCCAACAA GTGGTTCAGC
GGCTTCTGGG CCTGGGACAC CTGGAAACAG GCGGTCGGCA CAGCAGTCTT CGACCCGGCG
CTGGCCGAGT CGCAGATCCG CTCGATGTTC GACTACCAGG TCACCGCATC CGATCCGCAG
CGCCCGCAGG ACGCCGGGAT GATCCCGGAC TGCGTCTTCT ACAACGATCC GGCGCAAGGC
GGCGGCAACT GGAACGAGCG CAACTCCAAG CCACCGCTGG CCGCGTGGGC GGTGTGGTCG
GTCTACCAAC AGAGCGGCGA CGTCAGCTTC CTGAAGGAGA TGTACCCGAA GCTGGTGGCG
TACCACGACT GGTGGTACCG CACCCGCGAC CACGCCGACG ACGGTCTCGC GGAGTACGGC
TCGACCGTCG ACCCGCAGAA CGCGACCGCC GAGGACCAGC GCCAAGCGGC GGCGTGGGAG
AGCGGAATGG ACAACGCGCC GCGCTTCGAC GCCACCCTCG GCACCGGCGT GGTCGACAAC
ACCGACGCGG CAGGAAACGT GGTCGGCTAC TCACTGACCC AGGAGTCGGT CGACCTGAAC
TCCTACCTCG CCGCCGAGGA CGGCATCCTC GCCCAAATGG CCGCCCGACT CGGGCACCCC
ACCGACGCCG CACGCTACCG GGCATCGCAA AAGACGGTCA CAACAGCCAT CCAGCAAAAG
ATGTACGACC CGACAACCGG CTGGTTCTAC GACGCCTCCC TCACCACCGG CCAACCACTC
ACAACCCGAG GCCGAGGCAT CGAGGGCGCC ATCCCCCTGT GGGCCGGCGT CGCCACACCG
GCACAGGCGG CATCGGTACG CGCCAAGCTG CTGTCACCGA CCGAGTTCGA CACGCAGCTA
CCGTTCCCCA CCGTCTCAGC AAGTTCGCCG TACTACGACC CGACGGGATA TTGGCGTGGC
GCAGTCTGGA TGGACCAGGC GTACTTCGCC CTCGAAGGAC TCAAGCGCTA CGGCTACACA
GCCGACGCAG CAGCGCTGAC AGCAAAACTC CGCACCAACG CCGCGGGCAT GACAGGAGAC
GGCCCACTGA TGGAGAACTA CAACCCGACC ACCGGCGCCG CGATGAACTC GCGAGGATTC
AGTTGGTCGG CGGCGCTGCT GCTGGAGCTG GATCACTAG
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| Protein sequence | MSRSLRTLAV LALGVGLVLP VTAARAAPSS RSSAPPGSSS GSASPASFAN VLDLQGVPSV
ALPGDPATDV NPIGVFADRG AWHAYALPKV GDTASYGAFT GPLYIAQEYP WWLSKGISHL
TLSEGGRPID LASATHPVFT SLPGMLQQSF DVDGLHVVMQ LRYASDRTAL VQAFVENTSG
RSRKVGAGWT GSLLRPDTKP MKSAPSLHAT STGISVGFAK VRQTWDYLTD GTEKFQVTHA
EPVTTSVAGD AYTTALNAPL KLGPHGGQTL TWTESYTFTG ADYAAEQPVI AKTLRSPGSV
VAADDRRWRG YVASAVRGVP ASRQALAVKS VETLTTNWRS AAGALRHDGI TPSISNKWFS
GFWAWDTWKQ AVGTAVFDPA LAESQIRSMF DYQVTASDPQ RPQDAGMIPD CVFYNDPAQG
GGNWNERNSK PPLAAWAVWS VYQQSGDVSF LKEMYPKLVA YHDWWYRTRD HADDGLAEYG
STVDPQNATA EDQRQAAAWE SGMDNAPRFD ATLGTGVVDN TDAAGNVVGY SLTQESVDLN
SYLAAEDGIL AQMAARLGHP TDAARYRASQ KTVTTAIQQK MYDPTTGWFY DASLTTGQPL
TTRGRGIEGA IPLWAGVATP AQAASVRAKL LSPTEFDTQL PFPTVSASSP YYDPTGYWRG
AVWMDQAYFA LEGLKRYGYT ADAAALTAKL RTNAAGMTGD GPLMENYNPT TGAAMNSRGF
SWSAALLLEL DH
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