Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1998 |
Symbol | |
ID | 8333341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2261880 |
End bp | 2262278 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644955147 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003112759 |
Protein GI | 256391195 |
COG category | [K] Transcription |
COG ID | [COG1725] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGTCG AGCTCGACGA CACCAGCCCG GTCCCGCCGT ACGAGCAGAT CCGGGCCCAG GTGGCGGCGA TGATCGGCTC CGGCGCGCTG CCCCCGGGCA CCCGCCTGCC GCCGATCCGC CAGCTCGCCG GCGATCTGGG CTTGGCGGTG AACACCGTCG CCCGCGCCTA CCGCGAACTG GAGGCCGGGA AGCTGGTCGC CAGCCGCGTG CGCACCGGCA CGGTCGTCGC ACCGCGCACG CCGCACGCAC CCGACGACCG CACCGCCGCC GACACCCGCC GCCTCCTGAC CGAGGCGGTG CGCTCCTTCG CGGCCACCAC GCGGCGCCTC GGCATCGCCG ACCACGACGC GCTCGCCGCG ATCACGGCGG AGCTGCGGGG CGAGGCGTCC GGGTCCTGA
|
Protein sequence | MIVELDDTSP VPPYEQIRAQ VAAMIGSGAL PPGTRLPPIR QLAGDLGLAV NTVARAYREL EAGKLVASRV RTGTVVAPRT PHAPDDRTAA DTRRLLTEAV RSFAATTRRL GIADHDALAA ITAELRGEAS GS
|
| |