Gene Caci_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1998 
Symbol 
ID8333341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2261880 
End bp2262278 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content76% 
IMG OID644955147 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003112759 
Protein GI256391195 
COG category[K] Transcription 
COG ID[COG1725] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCG AGCTCGACGA CACCAGCCCG GTCCCGCCGT ACGAGCAGAT CCGGGCCCAG 
GTGGCGGCGA TGATCGGCTC CGGCGCGCTG CCCCCGGGCA CCCGCCTGCC GCCGATCCGC
CAGCTCGCCG GCGATCTGGG CTTGGCGGTG AACACCGTCG CCCGCGCCTA CCGCGAACTG
GAGGCCGGGA AGCTGGTCGC CAGCCGCGTG CGCACCGGCA CGGTCGTCGC ACCGCGCACG
CCGCACGCAC CCGACGACCG CACCGCCGCC GACACCCGCC GCCTCCTGAC CGAGGCGGTG
CGCTCCTTCG CGGCCACCAC GCGGCGCCTC GGCATCGCCG ACCACGACGC GCTCGCCGCG
ATCACGGCGG AGCTGCGGGG CGAGGCGTCC GGGTCCTGA
 
Protein sequence
MIVELDDTSP VPPYEQIRAQ VAAMIGSGAL PPGTRLPPIR QLAGDLGLAV NTVARAYREL 
EAGKLVASRV RTGTVVAPRT PHAPDDRTAA DTRRLLTEAV RSFAATTRRL GIADHDALAA
ITAELRGEAS GS