| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1950 |
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| Symbol | |
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| ID | 8333293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2205062 |
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| End bp | 2207383 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644955099 |
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| Product | integral membrane protein |
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| Protein accession | YP_003112711 |
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| Protein GI | 256391147 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0392] Predicted integral membrane protein |
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| TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.298583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0915506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGCAGG TTCTGGCGTT CCTGTCCATG ATCGGCGTGC CGATCGCGCT TGCTGTCGAG
CGCCTGGTCA AGCGGGAGAC TGTGCAGCTC GTCGATGCCG TCGGCGCCGC GACGCTTGCC
TACCTCGCTG CGTTCAGCGT CAATGTCGCG ACGTCTCACT TCCAGGATTC CGCCGTCGCC
CAAGCTGTTG GCGGTGCGAC GCCGATGCAG GTCCAGCTTG CGGTCGGGGT CGCCGCGGTC
ACCATCCTCG GGTTCAGCCG TTCCCAGTAC CGCACGCTCT TCTACAGCGC CGCCGCGCTT
GGCGGGCTGG CCGTCGTGCT GCTCGGGCAG GACTCTGTCA CCGGCGTTCT TTTGTCGGCG
CTGCTCGGCC GTATTGTCGC GATGGCTTGG CTCTCCGTAC GCGGCGTGCT CGACACCCGT
CCCGGCATGG GACGCATCCT CGCCGAACTC ACCCACGACG GCTTCCGCGC CCATCCCGGC
ACGGTCCGCG CCCTCGACCC CGGTACCGAC GGCGCGCGAC GCTTCCGGGT CAGCGTCACC
GCCACCGAAA CCCACCACAG CTTCGACTGC CTCGCCGGCC ACAAGCGCGC CCCAGCCGCC
GCGACCACGC CGACCGCCTC GACCACGCCG ACCACCCCGA ACACCCCAGC CGCCCCGCCC
CCCACCCCCA AAAAAACCCT CGACCTCTCC GTCCTCGACC AAAGCCAGCG CGCCGCCTAC
CTCGCCCCCC GCATCTGGCA GTGGATCCGC CTGCGCGGCC CGGTGCGCCG CCGCAGCTTC
TTCTCCCTGC GCCGCACGGT CGAAAGCGAA GTCCTGATGG CCATGGCGGT CGAGGCCGCC
GGCATCCGCA CCCCGCGCCT GCGCACCGCG CGCCAGGTGG ACCAGGACAC CGCGCTGCTC
GCCTACGACC ACCTCGACGC CCCGCGCGTC GCCGACCTCC CCGACCGTGC CTGGACCCCC
GCCCTGCACG GCGGTATCTG GGCCCTGTGG CAGCACTTGC GCAGCCGCCA ACTCGCGCAC
CGGGAGCTCA CCACCGACCA CCTCCGCCTG GACGCCGCCG GCGGTCTGTG GCTCACCGAT
GTCGGCTACG GCGAGATCGC CGCCGAGGAC CTCCTGTGCC GCCTGGACGG CGCCGAGCTC
CTCGTCTCCC TCGCCCTGCG CGTGGGTCCG GCGCGCGCCA CCGAGGAAGC CGTCGACGCC
CTCGGCCCGG ACACCGCCGC CTCCCTGCTC CCGCTGATGC AGCCGATCCT GTTCTCCGAG
GACACCGCCA AAGCCCTGCG ACGCCACCGC GCCGCCGGCG GGCGCGCGGA CATCGTCGGC
AGCATCCGCG ACCGCATCAT CGCCCTGCAT CCGGAAGCCG ACGTCCAGCC GGTCAGCCTC
GAGCGCGTGC GCCCCCGCAC CGTCCTGAGC ATCGTCGGCG GCGCGATCGC CTTCTACCTG
CTCGCCACCC AGCTCACCGG CTTCCAGGTG CCCGAGCTCG ACACCTGGCA GGCCTGGGGC
TGGGTCCTCG GCGCCGCCGT CGCCTCCGGT CTCACCTACG TCGCCGCCGC CCTGAACCTG
CTCGGCTGCG TCAAGGAACG CCTGTCCTTC CGCACGACCG CCACCGCGCA GGTCGCCGCC
GCCTTCGCCG GACTGGTCGC CCCGGCAGCC GTCGGCGGCC TGGCCGTCAA CACCCGCTAC
CTGCAACGCG CCGGCATCCC GGTGGCGCGC GCCGTCACCG CTGTCGGCGG CTCGCAGGTC
ATCGGCTTCG CGTGTTACCT CGTGCTGCTG CTGGTGTTCA GCGCCTTCGC CGGAAAACAT
CGGCAGGAAG CCGGCGGCCT GTCGGCGATC ACGCCGTCGG CGACGGTCAC CGGCGTGGTC
ATCGCACTGG CCGTGATCGG CCTGCTGGTC GCGGCGATCC CCCGGCTGCG CGCCGTCGTG
GTGAGCCGGG TCAAGCCGCT GGTCACCGAC ATCGGCCCGG AGTTCCTGCA AGTCGCGCGC
TCCCCGCGCA AACTGGTGCA GGCGTTCGGC GGCGCGGTGG GACTGCCGCT GGCGGCCAGC
GTGTGCCTGT GGGCGTCGGT GAACGCGGTC AGCGGCAGCG AGGTGAACCT CGCCGCGATG
GGCGTGGCCT ACCTGGTGGC CAAGGCGGTG GGCTCGCTGG TCCCGACACC CGGCGGCATC
GGCGGCGTCG AAGCCGTGCT CGCCGCCGGT CTGACCGCCG CCGGCGTGCC CTCGGCGACG
GCGGCGACCT CGGTCATCGT CTTCCGGCTG CTGACGTGGT GGCTGCCGGT GATCCCGGGC
TGGTTCGCCT TCACCGCGCT CCAGCGGCGC GGCGCGCTCT GA
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| Protein sequence | MVQVLAFLSM IGVPIALAVE RLVKRETVQL VDAVGAATLA YLAAFSVNVA TSHFQDSAVA
QAVGGATPMQ VQLAVGVAAV TILGFSRSQY RTLFYSAAAL GGLAVVLLGQ DSVTGVLLSA
LLGRIVAMAW LSVRGVLDTR PGMGRILAEL THDGFRAHPG TVRALDPGTD GARRFRVSVT
ATETHHSFDC LAGHKRAPAA ATTPTASTTP TTPNTPAAPP PTPKKTLDLS VLDQSQRAAY
LAPRIWQWIR LRGPVRRRSF FSLRRTVESE VLMAMAVEAA GIRTPRLRTA RQVDQDTALL
AYDHLDAPRV ADLPDRAWTP ALHGGIWALW QHLRSRQLAH RELTTDHLRL DAAGGLWLTD
VGYGEIAAED LLCRLDGAEL LVSLALRVGP ARATEEAVDA LGPDTAASLL PLMQPILFSE
DTAKALRRHR AAGGRADIVG SIRDRIIALH PEADVQPVSL ERVRPRTVLS IVGGAIAFYL
LATQLTGFQV PELDTWQAWG WVLGAAVASG LTYVAAALNL LGCVKERLSF RTTATAQVAA
AFAGLVAPAA VGGLAVNTRY LQRAGIPVAR AVTAVGGSQV IGFACYLVLL LVFSAFAGKH
RQEAGGLSAI TPSATVTGVV IALAVIGLLV AAIPRLRAVV VSRVKPLVTD IGPEFLQVAR
SPRKLVQAFG GAVGLPLAAS VCLWASVNAV SGSEVNLAAM GVAYLVAKAV GSLVPTPGGI
GGVEAVLAAG LTAAGVPSAT AATSVIVFRL LTWWLPVIPG WFAFTALQRR GAL
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