Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1863 |
Symbol | |
ID | 8333206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2110162 |
End bp | 2111340 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644955012 |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_003112624 |
Protein GI | 256391060 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.97552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGCCGA GTCCTTCGTC GCTCCCGTTC GACGACGCCC CGACCGGCTT GAGCCCGATC GTCCCCGCGG TCGAATCGCC GTCCCCTGCG ACGCTCGCCG ACGCCTCCGA TGGCTCTGAC GGCTCCGACG CTGCCGCGGC CCGCCGTGCC CGCGAAGCCG AAGACGCGCA CTGGCCCGGC GCCCGCCGCC AGATAGCGTT CCTGACCATC ATCGTCAGCC TGCTGGTTCT GGCGGTCCTG CTCGGTCACC GCTACCTGCC CGACGTCCTG GGCTTCGGCT CCCTGATCGA CACCTTCCTG CCCTGGACCG CCGCCCCTCT GCTGCTGGCG CTGCCCGCGG CCTTGTTCAG CCTCAAGAAG TGGGCCATCG GCATCTCCCT GCTGACCTGC GCGGTCTGGG CCGGGAACTT CGCGCCGACG ATGCTGCGCA GCGGCGGCTC GGGACCGGCC GACATCAGGG TGCTCAGCCA GAACCTCTCC TCCGGCGACG CCGGCGCCCC CGACCTGTCC GGCATCGGCC AACTGGCCGA ACAGCGCGGC GCCGACGTCG TCGTCCTGCA GGGTCTGTCG AAGAACGTCC AGGCAACCGA CCAGACGGCT CCCGCTCGCT ACCCCTACCA CCTGGCCATG TACGAGTTCG TGGTCTGGTC GCGCTATCCG ATCGGCTCCA CCCAGCCGGT GGACCTGACC GCGGGCGGCC GCCCGGCGGG CTTCGTACAG TCCGGCGCCG CCGCCGGCGA CAGTTCCTCC GGAACTTTCG GCGGACTGCT GCGGTTCACC CTGGATCTGG ACCAGAGCCG GCAGGTCACC GTCTACGCCG TACACCTGCC GCAGCCCTCG TTGTCGCACA GCGGCTTCGG CGTGGCGCGC GACGAGGCGC TCGAGCAGCT GGTGAGCGAC GTGCAGGCGG AGAAGTCGCC GAACCTGGTC GTGGTCGGCG ACCTGGACGT GGCCCAGACC GACCGCGCCG TGCGTCCGCT GCTGCGCTCC TCGACCGGAC TGGTGTCGGC GCAGGCCAAG GCTGGCAGCG GGTTCGGCTT CACGTGGCCC GCGACGTTCC CGGTGGTGCG GCTGGACGAC GTGCTGACGC GCGGCCTCAC GCCGGTCGCC AGCGTCGTGC TCCCGGCGGT GGGACCGCAG CAGGCGCACC GGCCGATCGA GGCGGATCTG AAGTTCTGA
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Protein sequence | MSPSPSSLPF DDAPTGLSPI VPAVESPSPA TLADASDGSD GSDAAAARRA REAEDAHWPG ARRQIAFLTI IVSLLVLAVL LGHRYLPDVL GFGSLIDTFL PWTAAPLLLA LPAALFSLKK WAIGISLLTC AVWAGNFAPT MLRSGGSGPA DIRVLSQNLS SGDAGAPDLS GIGQLAEQRG ADVVVLQGLS KNVQATDQTA PARYPYHLAM YEFVVWSRYP IGSTQPVDLT AGGRPAGFVQ SGAAAGDSSS GTFGGLLRFT LDLDQSRQVT VYAVHLPQPS LSHSGFGVAR DEALEQLVSD VQAEKSPNLV VVGDLDVAQT DRAVRPLLRS STGLVSAQAK AGSGFGFTWP ATFPVVRLDD VLTRGLTPVA SVVLPAVGPQ QAHRPIEADL KF
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