Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1644 |
Symbol | glyA |
ID | 8332987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1863554 |
End bp | 1864816 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644954794 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_003112406 |
Protein GI | 256390842 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.172303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTCGC CCGCCATTCC CGAACTCGCT CAGGAAGATC CCCAGATCGC CGGTCTGATC GAGGACGAAG CCCGCCGCCA GTACGAGAAG ATCCGGATGA TCGCCTCGGA GAACTATGTC TCCGCGGCGG TCCTGGAAGC TTCCGGCACG GTCCTGACCA ACAAGTACTC CGAGGGATAC GCCGGCCGCC GGTACTACGA GGGCCAGCAG TTCATCGACC CGATCGAGAC GATCGCGATC GACCGGGCCA AGGAGCTGTT CGGCGTGGCG CACGCCAACG TGCAGCCCTA CTCCGGCTCC CCGGCGAACC TCGCGGTGTA CCTGGCGTTC CTGAAGCCCG GGGACACCTT CATGGGCGCG GGCCTGGCCG CCGGCGGCCA CCTGACCCAC GGCTCGCCGG TGTCGGTGAC CGGCAAGTGG TTCACCCCGG TCGCCTACGG CGTCTCCCGC GAGACCGGCA TCGTGGACAT GAACGAGGTC CGCGACCTGG CCCTGAAGGA GCGCCCGAAG CTGATCTTCT GCGGCGGCAC CGCGATCCCG CGCACCATCG ACTTCCCGGC CTTCGCCGAG ATCGCCAAGG AGATCGGCGC CATCCTGGTG TCCGACATCG CGCACATCGC CGGCCTGGTC GCCGGCGGCG CGCACCCCTC CCCGGTCGGG TACGCGGACG TCATCACCAC CACGACGCAC AAGACCCTGC GCGGTCCGCG CGGCGCGATG ATCCTGACGA CCGAGGAGTA CGCGACCCCG ATCGACAAGG CCGTGTTCCC CGGCCTGCAG GGCGGCCCGC ACAACCACAC CACCGCCGGC ATCGCGGTGG CGCTGAAGGA GGCCGCGCAG CCGGAGTTCC GGACGTACGC GGCGACCGTC GTGGCCAACG CCAAGGCGCT GGCCGCCGGT CTCACCGAGC GCGGCTGGGA CCTGGTGTCC GGCGGCACGG ACAACCACCT GATCCTGGCC GACCTGACGC CCAAGGGCGT CACCGGCAAG GTGGCGGCGA AGGCGCTGGA CGCGGCCGGG ATCGAGCTGA ACTACAACTC GGTGCCGTTC GACCCGCGCA AGCCCTTCGA CCCCTCCGGC ATCCGGCTCG GCGCCGCCGC GATCACCACG CGCGGGCTGA AGCCGGAGCA GATGGGGCAG GTCGCGCAGT GGATGGACGA CACGGTGCAG GCCGCCGCCA AGGGCGACAC CGACGAGTAC GCGCGGATCG CGGGGCAGGT GCGCGAGCTG ATGGCGCAGT ACCCGATGCC GGGTTGGGCG TAG
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Protein sequence | MHSPAIPELA QEDPQIAGLI EDEARRQYEK IRMIASENYV SAAVLEASGT VLTNKYSEGY AGRRYYEGQQ FIDPIETIAI DRAKELFGVA HANVQPYSGS PANLAVYLAF LKPGDTFMGA GLAAGGHLTH GSPVSVTGKW FTPVAYGVSR ETGIVDMNEV RDLALKERPK LIFCGGTAIP RTIDFPAFAE IAKEIGAILV SDIAHIAGLV AGGAHPSPVG YADVITTTTH KTLRGPRGAM ILTTEEYATP IDKAVFPGLQ GGPHNHTTAG IAVALKEAAQ PEFRTYAATV VANAKALAAG LTERGWDLVS GGTDNHLILA DLTPKGVTGK VAAKALDAAG IELNYNSVPF DPRKPFDPSG IRLGAAAITT RGLKPEQMGQ VAQWMDDTVQ AAAKGDTDEY ARIAGQVREL MAQYPMPGWA
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