Gene Caci_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1582 
Symbol 
ID8332925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1789669 
End bp1790742 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content72% 
IMG OID644954732 
Productregulatory protein RecX 
Protein accessionYP_003112344 
Protein GI256390780 
COG category[R] General function prediction only 
COG ID[COG2137] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.57271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCG GTTGGGGCCG GTTCCAGGAC GAGGGAGCCG GTCCCGACTG GTTGGCCGCG 
GAGGGGGAGA GCGACGGCGC GCCCGGGTGG GCCGCGCCGG GTTCTGGCAC GGGGGAAGAC
AACACCGGAG CGGGCTCGCA GGGCGAGCCT GGTTGGGGCG CGCGGAGTAC CGACGCGTCA
GCAGCGAAGT CTGGAGCGGG CTCGGGGCAG GGCGAGCCGA GCGCATCTGA CGACGGCGCG
CCCGGCTGGG CCGCGCCCGC CGAGCCGGGC ACCGATTCCG CGCCGAGCGG CTGGGCCTCG
CTGGGCGATT CCTCCGGTGG CCGAGGCGCT GTGCCGAAGC CGTCGAAGCG ATCGGAGCCG
TCGAAGCAGT CGGAGCGCGG GGATTCGGCA CGCTCCGGCC AGCGGCGCGA CTTCGGCGAG
GACCGGCGCG GCGGGTCGGC GTCGGCATCG TCTGCTTCAG CTTCGGCTTC GGCGAAGAAG
AGCGCTGCCA AGAAGACCTC CGGCGGCTGG TCGTCGCGTC GCAAGGACCG GGATCCGGCC
GATGCCGACA AGCCCAAGCC GCAGCTCTCG CGCGAGAAGC TGGAGCAGCG CGCGAAGAAC
ATCTTGATGT ACCACCTGGG CCGGCAGATG CAGACCCGCT CGCAGTTGGC CGATCGGCTG
CGCAAGAAGG AGATCCCGGA CGACATCGCC GAGGCGGCGC TCGATCGGTT CGAGGAGCTG
CACCTGCTCA ACGACACCGA CTACGCCGAA GTCTTCGTCC GCTCCCGCCA CAACGAGCGC
GGGTTGGCCA AGCGGGCCCT GGGCTACGAG CTGCGCAAGC GCGGGATCGA CGACGAGACC
GCCGCCGAGG CGCTGTCCAC GCTCGACGAG GACCAGGAAG CCGCCACCGC GCGCCGACTT
GTCGACTCCC GGCTGCGCGG GACTCGCGGT CTGGATCCGC AGGTGCGCAC CCGGCGGTTG
GTCGGGATGC TCGCGCGCAA GGGTTACTCC TCCTCCATCG CCTTCCGGGT CGTGAAGGAG
GCGCTGGCCG AGGAAGGGCT GGACGTCGAT CTCGGCGATC CGGGCTTCGA CTGA
 
Protein sequence
MSAGWGRFQD EGAGPDWLAA EGESDGAPGW AAPGSGTGED NTGAGSQGEP GWGARSTDAS 
AAKSGAGSGQ GEPSASDDGA PGWAAPAEPG TDSAPSGWAS LGDSSGGRGA VPKPSKRSEP
SKQSERGDSA RSGQRRDFGE DRRGGSASAS SASASASAKK SAAKKTSGGW SSRRKDRDPA
DADKPKPQLS REKLEQRAKN ILMYHLGRQM QTRSQLADRL RKKEIPDDIA EAALDRFEEL
HLLNDTDYAE VFVRSRHNER GLAKRALGYE LRKRGIDDET AAEALSTLDE DQEAATARRL
VDSRLRGTRG LDPQVRTRRL VGMLARKGYS SSIAFRVVKE ALAEEGLDVD LGDPGFD