| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1095 |
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| Symbol | |
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| ID | 8332430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1237660 |
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| End bp | 1240419 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644954243 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003111862 |
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| Protein GI | 256390298 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.860504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACAG CCCGAGATCG CAGCACCGCA GACCGCCCAC GCCAGGTGAT AGGCAGGACC
GCCGAGGTCA GCGCACTGGA CGGTGCCCTG AACCAACTCC GGGCGGGCCG CGGACGGGCG
ATCGCGTTGG CCGGCGAGCC GGGCATAGGG AAAAGCACTC TGGTCACCTA CCTCGCAGCC
CGCGCCCGCG CGGCCGGAAT CCAAGTCCTG GGACCGGCTT TCTGCGACAC GATCGCGGCC
ACCGCGACCA CCTCAGCCGA CGCCGGCGCA GCCGCGAACG CGAACGCACA CACAAACGCG
AATTCGAACA GAAACGCGAA CGGCGTCGCC CGCGCCGACG CCAGGACCAA ACCGAAGTCC
CGCGACGCCG TGGTCATAGC CGCCGACGAG CTCCACCGCA TATCCCCGCA CCACCTGCCC
GCCCTGGAAC GCCTCATCTG GTCGGCCGCC GACGCCCCGA CCCTCCTGCT CCTGGCCTAC
CGCCGACGCC AGCTCGCCCC GGCGGTGGCC GCCGCCGTCT CCCGCGCCGA GGCCGCGGAC
CTGCTCGACG TCTGGGAACT GGGCCCGCTG TCCAAGGACG AGGCCCGCGA ACTCGTCGGC
GACCTGCCGA ACCTCGACGC CGTCCACGGC GCGTCCGGCG GCAACCCGCA GTACCTCAGG
ATCCTGAGCG CCGACGGCGA CCCGCACGCC GACGCCGCCC GCGCCGTCGT CGGAGAACTC
GCCGACCTGG ACCCCAGAAC CCTGACCACG CTGCAAACCC TCGCCGTCCT CAGGGAACCG
TCGCACCCGC AGCTGATCGC CGCCGTCGCC GAACTCTCTG CCGCCGAAGC CCTCGACGCC
CTGGACTCCC TGACCCGGCT CGACATCGTC CGCACGACCG GCACGATCGC CCGCTTCGCC
ATCCGCCACC CCGCGGTCGG CGAGGTCGTC TACCGCCGCA TCGACCCCGG CTCGCGCATC
GCGATCCACC TGCGTGCCGA AAGCGTGCTG GCCAGCCAGT CCGCGCCGAT CGCCCGCCGC
GCCTACCACC TCACGCACGC CGCCGACCCC AGCCGCCCGG AGCACACAGC GACCCTGATC
ACCGCTGCCC GCCTCAGCAT CCACACGGCT CCCGCCGACG CCGCGAGGTA CCTCCAGGCG
GCGCTCCCGC AGCTTCCGGA GGACTCCCCG GAGTGGCGCG AGATCCAGGT CCTCCTGGCT
CGCGCACGCC TGCTGACCGG ACAAGCCTCC GAAGGCCGCA CCCTGCTGCA CGCGCTGACC
GCGATGGTGG ACCAGCCCTC CGGCGACCTC ACGGCAGTCG CCGTCGCCGG ACGCCTCGAA
CGCCAACTCG GCCGGCTGTC CGAGTCCTCC GCGATCGTCC GCTCCGGCCT GGCAGCCGTC
CCCGGCAACG ACTCCTCGGC CGCCGCGCTG CACAGCATGC AAGCCGACAA CGCCCTGGAC
CAAGGCGACT ACGTGCGCGC CCAACTGCAC GCCGACACCG CCGCCGCGCT GGCCCACGGC
AGCCTCGATC TCGTCGGCGA GGCGCTGGCG AAGGCCCAGG CGGCGCTCGC CTACCTGTCC
TCCGACGACC TCGACGCCGC CGAGACCTCC CTGACCCAGG CTGCCGAACT CGTCGACGCC
GCCTCGGACG CCGCACTGTT GAAGAACCTC GAGGCCGTCT ACCAACTCGG CCTGAGCGAA
TCGATGATGT CCCGGCTCGC CGACGCCGAA CGCCACCTGA TCCGCGGCGC GTCGCTGTCC
CGGCACAGCG GACAGAACTA CGTCCTGCCG ATGATCTTGA AATCCCTGGC GGACACCCAA
GTCCGCGCCG GCAGCGTGAA ACGCGCCCTG GTCACCCTCG ACGAGGCCGA CGTGTACGTC
GAGAGCGCCG AGAACCCGGC GACCAAGGCC ATCCTCGCGA TCATCCGCGC GCTGGCCCTG
TTGTTCACCG GCGTCAGCGA CGCGCCGCAA CAAGCCCTCG CCTGGGCCGA CCGCGCCGTG
GCCTGGGCCG AGGGCAGCAC CACCGTGTGG GCGGTCGTGG TCCGCTGCCG CCGCGCCGAG
ATCGTCCTGG CGGCCGGCGA CCCGTCCCGC GCGGGACGGT TGCTGCTGGA GGCAGTGGGC
GGCCCGGACA TGCCCAACCT GATCGCCGCT CGCAAGACAA GGTCCTGCGA CACCCTCACC
GAGGTGGCGA TGTACGAGAA CGACCACGCG GCCGCCGACC GCTGGGCCGA ACTCGCCGAG
AACTCGCTCG AACGCATCTC CTCTCCCAGC AACAGAGCCT TCGCCTTCCG CGCCCGCATG
CGCGCCCAGA CGATGAACGA CGACCTCAAA GCCGCCCTCG CCAGCGCCCA GCAAGCCATC
GAGAGCTTCA CAGCGAGCGG CGAGCGCATC GAGATCTGCC GAACCCTGTC GGCGGCAGCC
GCGCTCGCAG CAGCCCTCGG AGACCACAAG CAGGCCCAGG AATGGCTCGA CCGCGCCGCC
AGCCTGGCCG AGCAGTGCGA GGCGACCCTG TTGATCAGCG AGACGACCAG GCAGCGCACC
CGCCTCACCG AGAAGGTGGC CGAGCGGGAA GCGACAGACG CCCTGGCCGG ACTGACCGCG
CGCGAGCGCG AGATCGCCGC CCTGGCGAGC ACCGGCGTCA CGAGCGGGCA GATCGCCGAA
ACGCTCTTCC TGAGCCGCCG GACGGTCGAC GCCCACCTCG GCCAGATCTA CCGGAAGCTG
GGGGTGTCGA GCCGGGCGGC GCTGATCCGG ACGGTCCTGG ACGCCGAGGC GCGGAGCTGA
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| Protein sequence | MPTARDRSTA DRPRQVIGRT AEVSALDGAL NQLRAGRGRA IALAGEPGIG KSTLVTYLAA
RARAAGIQVL GPAFCDTIAA TATTSADAGA AANANAHTNA NSNRNANGVA RADARTKPKS
RDAVVIAADE LHRISPHHLP ALERLIWSAA DAPTLLLLAY RRRQLAPAVA AAVSRAEAAD
LLDVWELGPL SKDEARELVG DLPNLDAVHG ASGGNPQYLR ILSADGDPHA DAARAVVGEL
ADLDPRTLTT LQTLAVLREP SHPQLIAAVA ELSAAEALDA LDSLTRLDIV RTTGTIARFA
IRHPAVGEVV YRRIDPGSRI AIHLRAESVL ASQSAPIARR AYHLTHAADP SRPEHTATLI
TAARLSIHTA PADAARYLQA ALPQLPEDSP EWREIQVLLA RARLLTGQAS EGRTLLHALT
AMVDQPSGDL TAVAVAGRLE RQLGRLSESS AIVRSGLAAV PGNDSSAAAL HSMQADNALD
QGDYVRAQLH ADTAAALAHG SLDLVGEALA KAQAALAYLS SDDLDAAETS LTQAAELVDA
ASDAALLKNL EAVYQLGLSE SMMSRLADAE RHLIRGASLS RHSGQNYVLP MILKSLADTQ
VRAGSVKRAL VTLDEADVYV ESAENPATKA ILAIIRALAL LFTGVSDAPQ QALAWADRAV
AWAEGSTTVW AVVVRCRRAE IVLAAGDPSR AGRLLLEAVG GPDMPNLIAA RKTRSCDTLT
EVAMYENDHA AADRWAELAE NSLERISSPS NRAFAFRARM RAQTMNDDLK AALASAQQAI
ESFTASGERI EICRTLSAAA ALAAALGDHK QAQEWLDRAA SLAEQCEATL LISETTRQRT
RLTEKVAERE ATDALAGLTA REREIAALAS TGVTSGQIAE TLFLSRRTVD AHLGQIYRKL
GVSSRAALIR TVLDAEARS
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