| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0554 |
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| Symbol | |
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| ID | 8331881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 638979 |
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| End bp | 640052 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644953706 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_003111333 |
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| Protein GI | 256389769 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.402049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00292352 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCTGTCG GTCTGCTGTA CCGGATCTTC GTGAGCGTTC TGTCATGGCT GGCTCTATTG
GCTCGATCGC AGGCGTCGAA AAACGCCGAG ATACTCGTGT TGCGCCAGGA GGTGTCGGTG
CTACGCCGCA CGAATCCGAA GTCGAGAATC TCCTGGACCG CCCGAGCCGT GCTCGCGGCG
CTGTCCAAGC TTCTGCCCAA GACCCTTCGC GGCCACCGGA TCGTCACCCC GGGCACGCTG
CTGCGCTGGC ACCGCCGCCT GGTCGCGAAC AAGTGGCGCC AGCCGAAGGC GCCGGGCCGG
CCACCGATCA GCGACGGACT CGTCCAGCTG ATCGTCACCA TGGCACAGGA GAACCGCACC
TGGGGCGCGG TACGGATCCA AGGCGAGCTG CGCCGGCTCG GACACCGCGT GGCCGCGGCC
ACGATCCGCA AGGTCCTGCG CGCCCGCCGG ATCCCGCCGC CGAAACACCG CGACGACTCC
TGGCGCACGT TCCTGCGGAC CCAGGCCGAT ACCCTGCTGG CCACGGACTT CTTTCACATC
GACTGTGCAG TCACCCTCGC CAGGGTCTAC GTCGCGTTCG TCATCGAGTA CTCCACCCGC
CGGGTCCACC TGCTCGGCAT CACCCGATAC CCGACCGCCG CCTGGGCCAT CCAGTTGGCC
AGGGACTTCA CCGCAGACCT CGAAACCACA GGACGCCGCT TTACACACCT CGTCCGGGAC
CGTGACGCCA AGTTCACCGC CGCGTTCGAC GCGGTCCTCA GCGCCGCCGG CATCACCGCG
GTCACGACCA TGCCGCAAAC ACCGAAGATG AACGCCATCG CCGAACGGTT CGTCGGCACC
GTTCGTCGCG ACTGCACCGA CCGTATCCTC GTCGCCGGCG AACGCCATCT GCGTGTCATC
CTGAACGGGT ACATCGCGCA CTACAACGCC GGCCGTAGCC ACCAAGGCGC CGGAATGAGC
TTGCGCGCCC CAGACGACGA TCCGAACGTG ATCCCGTTCC CAGCCCAGAT CGACCAGATC
CGACGAAAAC GCATCCTCGG CGGACTGATC AACGAGTACG AGCCTGCCGC ATAA
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| Protein sequence | MAVGLLYRIF VSVLSWLALL ARSQASKNAE ILVLRQEVSV LRRTNPKSRI SWTARAVLAA
LSKLLPKTLR GHRIVTPGTL LRWHRRLVAN KWRQPKAPGR PPISDGLVQL IVTMAQENRT
WGAVRIQGEL RRLGHRVAAA TIRKVLRARR IPPPKHRDDS WRTFLRTQAD TLLATDFFHI
DCAVTLARVY VAFVIEYSTR RVHLLGITRY PTAAWAIQLA RDFTADLETT GRRFTHLVRD
RDAKFTAAFD AVLSAAGITA VTTMPQTPKM NAIAERFVGT VRRDCTDRIL VAGERHLRVI
LNGYIAHYNA GRSHQGAGMS LRAPDDDPNV IPFPAQIDQI RRKRILGGLI NEYEPAA
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