Gene Caci_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0309 
Symbol 
ID8331636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp349752 
End bp350393 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID644953476 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003111103 
Protein GI256389539 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.302465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGCA ACTCACAGTC GGAGCACGAC CCCGGCGGTA CCAAGGAACG CATCCAGCAC 
GTCGCGCTGG AGCTGTTCGT CCTGCACGGG TATGAGAAGA CCTCACTGCG CGAGATCTCC 
GACCGCCTCG GCATCACCAA GGCCGCGCTG TACTACCACT ACGCGTCCAA GCAGGAGCTG 
CTGAAGTCGG TCACCCAGCC GCTGATCGAC GAGTTCGAAC TCCTGGTCGC CGGCGATCCG 
GATCCCGAGA CGCTGCTGCG TTCCTACGTC GACCTGCTGC ATCGGCACCA GGCGGTCTTC 
CAGTTGGTCG CCAACGACCA CGCCAGCCTG GCCGCCGCCG AGCTGGTCGA GCGCTCGGTG 
AAGCTGCGGC GGGACGTCGT GCGCAGGCTG GCCGGCCCCG AGCCGCAGCC CGCCGACTAC 
ATCCGCGCCG CGGCTGCGTT CGGAGCCATA TCGCAGGGCT TCATGCTCGC GCGGCGCGTC 
GAGCCGGCGG CCGATCCGGC GCTGCCGGAC GTCGAGGCGA CCGCGGAGAA GGCTGCCGAG 
ACGGCTGCCG GACTACCGGC TCCGGCGGAC TACCCCGAGG GCGCCGAGCT CACGCGGATC 
TTGATGGACA CCGCGCTGGC GGTGCTGCGC TCCGGGTCCT GA
 
Protein sequence
MRRNSQSEHD PGGTKERIQH VALELFVLHG YEKTSLREIS DRLGITKAAL YYHYASKQEL 
LKSVTQPLID EFELLVAGDP DPETLLRSYV DLLHRHQAVF QLVANDHASL AAAELVERSV 
KLRRDVVRRL AGPEPQPADY IRAAAAFGAI SQGFMLARRV EPAADPALPD VEATAEKAAE 
TAAGLPAPAD YPEGAELTRI LMDTALAVLR SGS