7 homologs were found in PanDaTox collection
for query gene CPS_5039 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003910  CPS_5039  hypothetical protein  100 
 
 
488 aa  985    Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2376  hypothetical protein  27.66 
 
 
413 aa  98.6  2e-19  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000000199607  n/a   
 
 
-
 
NC_008554  Sfum_2508  hypothetical protein  25.3 
 
 
448 aa  85.1  0.000000000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_0432  hypothetical protein  25.83 
 
 
408 aa  64.7  0.000000003  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_1692  hypothetical protein  23.12 
 
 
381 aa  59.7  0.0000001  Ralstonia pickettii 12J  Bacteria  normal  0.12804  normal 
 
 
-
 
NC_012849  Rpic12D_5304  hypothetical protein  23.12 
 
 
381 aa  59.7  0.0000001  Ralstonia pickettii 12D  Bacteria  normal  0.374361  normal 
 
 
-
 
NC_013501  Rmar_2537  hypothetical protein  20.2 
 
 
374 aa  50.4  0.00007  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
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