Gene CPS_4869 details

Gene Information

• Locus tag: CPS_4869
• ID: 3518795
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 5165131
• End bp: 5165640
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637287308
• Product: putative OHCU decarboxylase
• Protein accession: YP_271508
• Protein GI: 71278578
• COG category: [S] Function unknown
• COG ID: [COG3195] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03180] OHCU decarboxylase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATATTAG AAGATTTAAA CCAATTACCT GCAGCGGAGG CTAGCCATAC ATTTATGCAG 
TGTTGCTCCG CAAGTGCTTG GGTAAAAAAA ATGGTTACAG CGCGTCCATT TTCTTCTGAG 
CTAGCAATAA AAAAAGCCGC TGATGATGCG TGGCAAGGTT TAACTGAACA AGATTATTTT 
GAAGCCTTTG AAGGTCATCC AAAAATTGGT GATGTCAGTA GTTTACGTGC TAAGTATGCT 
AATACCAAAG AATTGGCAGG TAACGAGCAA GGTTTAGTTA AAGAAGCAAA TGACGATGTA 
CTTGAAGTAC TTTCTCAAGG TAACAGCGAC TATGAAAAAA AATTTGGCTT TATTTTTATT 
GTTTGTGCAA CCGGAAAAAG TGCTAAACAA ATGTCTGATT TATTACAGGC ACGTCTACCA 
AATAATAAAA CGCAAGAGCT TGTTAATGCC GCTGAAGAGC AACGTAAAAT ATTTCAACTA 
CGCATTGATA AAGCATTAGC TGAAGGCTAG 

 

Protein sequence

MILEDLNQLP AAEASHTFMQ CCSASAWVKK MVTARPFSSE LAIKKAADDA WQGLTEQDYF 
EAFEGHPKIG DVSSLRAKYA NTKELAGNEQ GLVKEANDDV LEVLSQGNSD YEKKFGFIFI 
VCATGKSAKQ MSDLLQARLP NNKTQELVNA AEEQRKIFQL RIDKALAEG