| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4648 |
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| Symbol | |
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| ID | 3522247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4909020 |
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| End bp | 4912145 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637287087 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_271295 |
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| Protein GI | 71281775 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.84833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCTT GGTTCGCACG AAATCATGTT GCCGCCAACT TACTATTAAT TACCATTTTA
ATAGCAGGTT TATTTAGTTT ATCTAATCGC ATTCCGCTAG AAGTATTTCC CTCTTTTGCC
ACCGACCGCA TTAACGTTAA TGTGTCATTA CGCGGCGCGA CTCCAGAAGA TGTAGAAAAA
AGCATATCTA TACGCATAGA AGAAGCAGTG CAAGATTTAG AAGGCGTTAA ACAAATTGCT
AGTAGATCAC AAGAAGGCTC TTCAGCGGTC AATATCGAAG TTGAGTCAGG CTACGACCCT
CGCGAGATGC TCGCCGATAT AAAAAGCCGT GTTGACGAAA TAAATACTTT TCCTGCTGAT
GCAGAAAAAC CCGTAGTCTC TTTAGCGACA CGTAAACGTG AAGTTATTGC CGTGACTATT
GCCAGCATCT ATAGCGAGAA AGAAACGCGT GAATTCGCTG AAAAAGTCAG AGATGATTTA
TTAAAAATAC CCGCGATTAC CCAAGTGGAA CTCAGTGGTG TGCGCGACTA CGAAATATCG
ATTGAAGTAC CTCAAGATAA ATTACGTCAA TATGATTTAA CCATAGCGAA AATATCTTCT
GCTATTTCAG ATTCAAGTAC TGATATTTCT GCTGGTAATT TAAAAACCAA AGGTGGTGAT
ATTCTGTTGC GCTCAAAAGG CCAAGCCTAT CGCAAAGACG AGTTTGAAAA AATAGCCATT
AAAACGAATG TTGATGGTTC TATCATTCGC CTAAGTGATA TTGCCATCAT CAAAGATGAC
TTTGAAGAAA CCCCTGTTCG TACTCGTTTC AACGGTAAAC AAGCCGCATT TATAGATGTT
TATCGAATCG GTCAACAAAG CGCGATTGAC GTTGCCGATG CCGTAAGAAC CTATATTAAT
GATCAACAAA GTACATTGCC TGTAGGCGTT GAATTAAGTT TTTGGGATGA CGATTCTCAA
ATCGTGAAAA ATCGTATTTC GACATTAACA ACCAGTGCCT TACAAGGCGG TATCTTAGTA
CTAGCCTTAT TAACCTTGTT CCTCAGACCC TCCATTGCCT TCTGGGTATT TATTGGCATT
CCGATTTCTT TTATGGGCGC CTTTATTATG ATGCCGGTGT TTGGTGTCAC CTTAAATATC
ATGAGTTTGT TTGGCTTTAT CTTGGTATTG GGTATTGTGG TCGATGATGC CATTGTCACC
GGAGAAAATA TTTATACTCA TCTAAAAACG TCAGAATCAG GTGAAATGGC AGCCATTCGT
GGCACCGAAG AAGTTGCCAC ACCAGTAACT TTTGGTGTAT TAACAACCGT AGCAGCATTT
CTGCCACTGG CCTTTATTGA AGGTGCACGT GGCGCTTTAT TTGCGCAAAT TCCAGTGATC
GTTATTCCGG TATTGATATT CTCTTTAATA GAATCAAAAT TCGTTTTGCC TTCGCATTTA
AAACACTTGA AACTACGTTC AGAAAAAGAA AAACAATCAA AGTTTAGTCA ACTACAGCAA
TCATTCGCTG ATGGTTTCGA GCAAGCGATA ATCCGTTTTT ACCAGCCCTT ATTGAAACGT
GCCATAAGCA ACAAGACCAC CACCTTAGTT GGTTTTGTCG GCGTTTTCTT AGTTATTCTT
GCCCTTATTA TGAGTGGTTG GACTAAGTTT ATATTCTTTC CGCGAATCCC TAGTGAAACC
GTAAGAGCAA CACTAACCCT ACCTGCAGGT ACACCATTTG AAGTAACCAA TAAGTATATT
ATTAAAATGG CTGAAAAAGC AGATGAGCTG AAACAGAAAT ATATTGAGCC ATCAACTAAC
AGCAGTGTCA TTATCAATAT ATTAGCAACC ACCGGCGGTC GTGGCGGTGC TTCAAACTCC
GGCAGTGTTC GTTTTGAAAT AACGCCACCA GAATCACGTG AACTTGCCAT CTCCTCTAGT
GAACTAGTTC GTGAATGGCG AAATTTAATT GGACCTATTC CAGGTTCGGA AAGTATTACC
TTTAGAGCGG AGATTGGTCG TTCATCAGAC CCCATTCATG TGCAGTTTAA AGCAAGTTCA
CTAGACACAT TGAAAGAAAT AACCGATAAA GTGAAATTAC GATTAGCCAC CTACCCTACG
GTATTTGATA TTGCTGATAG TTTATCTAAC GGTAAAGAAG AGCTGCAGAT TGAGTTAACA
GAACAAGGTA AAGCGTTAGG GTTAACCCGC GTTAGCATAT CAAATCAAGT AAGACGTTCT
TTCTTTGGCT CACAAGTACA ACGTATCCAA CGTGGTAGAG ATGATGTACG CGTAATGGTT
CGACTACCCA TAGAGGAACG CCGCACTATG GCTGATTTAG AAGATATTCT TGTGGTCACT
CCTTCAGGGG GCTCAGTACC ACTATCTCAT GTAGCCAAGC TTATCCCTGG TAAAAGTCCG
TCGACCATTT CAAGAATTGA TCGCTACCGC ACAGCCAATG TAAGTGCAGA TGTTGAAAAA
TCAAATACCA ATATGACGGT GCTGCAAGCT GATTTAAAAA GCTATTTAGA TGAGTTAATA
GTGCAATATC CAGGCGTTAG CCACTCCCTT GAAGGCGAGG CGAAAGAGCA GCGTGAATCT
TTTGGCTCGC TTGGTTGGGC ACTGGGCTTT GTCTTCTTTA TTATTTATGC GTTGTTAGCT
ATTCCTTTCA AGTCTTATAT TCAACCAATC ATCGTGATGA GCATAATTCC TTTTGGCATG
ATAGGTGCTG TTATTGGTCA CTGGATTATG GGTATGGAAT TAACCATCAT GAGCTTACTA
GGCATGTTGG CGCTAATCGG TGTAGTCGTG AATGACTCGC TAGTATTAGT AGATTTTATC
AATAAAAAAC GCAGCGAAGG CGGTGAGTTA ATGGAAGCGG TGTTAACTGC AGGTGCGGCT
AGATTTAGAC CGGTAATGTT AACCAGTTTG ACTACCTTTA TTGGTTTAAT GCCGTTGTTG
TTTGAACAAT CGACACAAGC ACAGTTTTTA ATCCCTATGG CAGTATCATT AGGTTTTGGT
ATTTTATTCG CCACTTTCAT CACCTTGATA CTAGTACCGG TCAATTATTT AATTGTTGAA
CGTTTAAAAA GCTTATTTTC ATCAGAGTCA CCTATCGACC AACAAAATAT CGCTGCACAA
GCTTAG
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| Protein sequence | MIAWFARNHV AANLLLITIL IAGLFSLSNR IPLEVFPSFA TDRINVNVSL RGATPEDVEK
SISIRIEEAV QDLEGVKQIA SRSQEGSSAV NIEVESGYDP REMLADIKSR VDEINTFPAD
AEKPVVSLAT RKREVIAVTI ASIYSEKETR EFAEKVRDDL LKIPAITQVE LSGVRDYEIS
IEVPQDKLRQ YDLTIAKISS AISDSSTDIS AGNLKTKGGD ILLRSKGQAY RKDEFEKIAI
KTNVDGSIIR LSDIAIIKDD FEETPVRTRF NGKQAAFIDV YRIGQQSAID VADAVRTYIN
DQQSTLPVGV ELSFWDDDSQ IVKNRISTLT TSALQGGILV LALLTLFLRP SIAFWVFIGI
PISFMGAFIM MPVFGVTLNI MSLFGFILVL GIVVDDAIVT GENIYTHLKT SESGEMAAIR
GTEEVATPVT FGVLTTVAAF LPLAFIEGAR GALFAQIPVI VIPVLIFSLI ESKFVLPSHL
KHLKLRSEKE KQSKFSQLQQ SFADGFEQAI IRFYQPLLKR AISNKTTTLV GFVGVFLVIL
ALIMSGWTKF IFFPRIPSET VRATLTLPAG TPFEVTNKYI IKMAEKADEL KQKYIEPSTN
SSVIINILAT TGGRGGASNS GSVRFEITPP ESRELAISSS ELVREWRNLI GPIPGSESIT
FRAEIGRSSD PIHVQFKASS LDTLKEITDK VKLRLATYPT VFDIADSLSN GKEELQIELT
EQGKALGLTR VSISNQVRRS FFGSQVQRIQ RGRDDVRVMV RLPIEERRTM ADLEDILVVT
PSGGSVPLSH VAKLIPGKSP STISRIDRYR TANVSADVEK SNTNMTVLQA DLKSYLDELI
VQYPGVSHSL EGEAKEQRES FGSLGWALGF VFFIIYALLA IPFKSYIQPI IVMSIIPFGM
IGAVIGHWIM GMELTIMSLL GMLALIGVVV NDSLVLVDFI NKKRSEGGEL MEAVLTAGAA
RFRPVMLTSL TTFIGLMPLL FEQSTQAQFL IPMAVSLGFG ILFATFITLI LVPVNYLIVE
RLKSLFSSES PIDQQNIAAQ A
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