Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4099 |
Symbol | aqpZ |
ID | 3518781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4314854 |
End bp | 4315552 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637286542 |
Product | aquaporin Z |
Protein accession | YP_270754 |
Protein GI | 71278603 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.53482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT ATATAGCAGA ATGTATTGGT ACCTTTTGGT TGGTTCTTGG TGGGTGCGGT AGTGCAGTAC TAGCCGCAGG GTTTCCTGAT GTAGGCATTG GTTTACTTGG TGTATCATTC GCCTTTGGTT TAACCGTGCT AACTATGGCT TATGCGATAG GTCATATTTC GGGTTGTCAT TTAAATCCTG CAGTATCGGT AGGTCTTTGG GCTGGAGGAC GTTTTCCTGC TAATGAATTA ATGCCTTATA TCATTGCACA AGTCATTGGC GCGATTCTTG GCGCTGGCGC TTTATACCTT ATAGCGAGTG GTCAACCAAG TTTTGATTTA TCAGCTGGTT TCGCGTCAAA TGGTTATGGA GCACACTCAC CTGGTGGTTA CTCTATGACA GCTGCCCTTG TCGCTGAAGT CGTATTAACT ATGATGTTTA TTTTTGTCAT TATGGGAGCA ACAGACAAAC GTGCCCCTGC AGGTTTAGCA CCTATCGCGA TTGGTTTGTG TTTAACCTTA ATTCATTTGA TCAGTATTCC GGTAACGAAT ACGTCAGTGA ACCCTGCACG TAGCACCGGT GTTGCATTGT TTGTTGGTGA TTGGGCTGTA GCGCAATTAT GGTTGTTCTG GGTTGCGCCC ATTGTTGGTG GTTTTATTGG TGCTAAGTTA TATCGCTTAG TTGCGAAAGA AGAACAAGAG GATAGTTAG
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Protein sequence | MNKYIAECIG TFWLVLGGCG SAVLAAGFPD VGIGLLGVSF AFGLTVLTMA YAIGHISGCH LNPAVSVGLW AGGRFPANEL MPYIIAQVIG AILGAGALYL IASGQPSFDL SAGFASNGYG AHSPGGYSMT AALVAEVVLT MMFIFVIMGA TDKRAPAGLA PIAIGLCLTL IHLISIPVTN TSVNPARSTG VALFVGDWAV AQLWLFWVAP IVGGFIGAKL YRLVAKEEQE DS
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