| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4007 |
|---|
| Symbol | |
|---|
| ID | 3520970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 4205344 |
|---|
| End bp | 4205790 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637286453 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_270665 |
|---|
| Protein GI | 71280504 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.177253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAATAT ATGAGCAGCT TATATTGTCT TTACGGCAAG TTAATCGTGC AGTTGACTTG
CACTCTAAAC AATTAAATAA GAAGTTTGGC TTAACCGGAC CTCAGTTATT AGTCATAAAA
AAAATAGTCG AATTAAAGGG ACCAATGGCA AAAATGGTAG CGAAAGCCGT TAATCTTAGC
CCTGCTACGG TCACCACCAT TATTGATCGT TTAGAAGTAA ACAAATTAGT GCAACGCAAG
CGCAGTGATT ATGATAAACG CAGGGTAGAA CTGTTTGTAA CTGACAAAGG GGCAAGCTTG
TTGCTTCAAG TACCACAATT ATGGCCGACT AATTTTATAA CACAATTTCA AGCGTTGGGG
TCATGGGAAC AAAACCAATT GCTTTCTTCA GTGCAACGCA TTGTCGATAT GATGGAGTCA
GAGTTTGATA CAGGACCAAG TGTATAA
|
|---|
| Protein sequence | MEIYEQLILS LRQVNRAVDL HSKQLNKKFG LTGPQLLVIK KIVELKGPMA KMVAKAVNLS
PATVTTIIDR LEVNKLVQRK RSDYDKRRVE LFVTDKGASL LLQVPQLWPT NFITQFQALG
SWEQNQLLSS VQRIVDMMES EFDTGPSV
|
|---|
| |