| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3879 |
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| Symbol | |
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| ID | 3523067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4051481 |
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| End bp | 4052188 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637286325 |
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| Product | putative ABC transporter, periplasmic substrate-binding protein |
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| Protein accession | YP_270541 |
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| Protein GI | 71282592 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAATT CTCTGTTAAT TATATTTTTA CTTCTTTCTT TTACTGCACG GTCCAACGAA
GAAGAGCTAA AAGTGGTAAC AGAAGATTGG CCGCCTTTTA TTTTAAAGGG CCAGGAAGTC
TCAGGAATAG TTACCAGTAA TATAAGGGAA ATACTGGCAT ACACCGATAT TAAATATTCG
ATAGATGTCT ATCCATGGGC AAGAAGTTTT CATTTAGCAA CAACCAATCC TAATATACTT
ATTTATTCCA TTTATAGAAC AAAGCAGCGA GAGTCAAAAT TTCATTGGTT TTGTCCCCTC
TATAAATCCA CCCCAATTCA TGTGTATAAA CTTGCGTCGA ATGAGATCAA TATAGATTCT
CTAGAGGCAT TAAAAACAAG TGTGGTAGGT ATCATGCGTG GAGATAATAG CCACAGTTAC
TTTCTACAAC AAGGATTTCA AGAGGGAGTG AATCTAGATA TATCTTCTAA TGAAGAAACA
AACCTGAAAA AATTAATTAA AGGGAGGATA GATGTTGTTA TTCAGTCTAA AGAATCACTA
AACTATCGCT TAGGTTTACT TGGAGCAGCA GATTTGAATC TTATGTCAGG CTTAGAAATA
TCAAAAGGTG AAAGTGCTGA GCATTGCATG GCACTGAGCC TTGGAACTAA ACCTGAAACA
ATTAATAAAA TAAAAAAAGG ATTCGAGCAG TGGCAAAAAA CTCAATAA
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| Protein sequence | MKNSLLIIFL LLSFTARSNE EELKVVTEDW PPFILKGQEV SGIVTSNIRE ILAYTDIKYS
IDVYPWARSF HLATTNPNIL IYSIYRTKQR ESKFHWFCPL YKSTPIHVYK LASNEINIDS
LEALKTSVVG IMRGDNSHSY FLQQGFQEGV NLDISSNEET NLKKLIKGRI DVVIQSKESL
NYRLGLLGAA DLNLMSGLEI SKGESAEHCM ALSLGTKPET INKIKKGFEQ WQKTQ
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