| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3714 |
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| Symbol | |
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| ID | 3519063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3865375 |
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| End bp | 3867078 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637286161 |
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| Product | glycosy hydrolase family protein |
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| Protein accession | YP_270381 |
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| Protein GI | 71278339 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5520] O-Glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.171767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA AAGCGATACT CATCGGGCTC ATATCTTCTA TAACGTTGAC TGGCTGTATG
TTTCAAGATC AAGGATCTCA AGTGAATAAC AAGACGAAAG AAATTAGTTA TCATTTATCA
ACAACAAGTG AAATTCTGTT AACGAGTGAG GCGGGTGCTA AAGTTTCACC ACAGCCAAAC
TTGACCTTTC AACAAGGTAA AGCTCAAGGC AAAGTGATTA CCATTAGACC TGATATTATT
AAACAGAACA TATTGGGTAT TGGTACTTCT TTTACCGAAT CTTCTGCTTT TGTTCTTGCG
CATTTAAGCA AAGAAAAAAG AGCAGAAGTC ATGGAAAATA TTTATGGTGA AAAAGGGGCT
AATTTTTCCA TTGCTCGAAC TCATATTGGC GCGACAGACT TTGCTGTGGA TGGTAAGTAT
TCTTATGCAC CAGTTAAAGA TGATGTAGCA CTCTCGTCTT TTAGTATCGC TGTTGATCAA
GATGGTTTTA AACAGCAAGA CCATGCAGGT ATTAAAGATG AGCAATTCGA TTTATTGCCA
ATGATCAAAC AAGCCTATGA AATTAAAAGT AAACAAAGTG ATAAAGATTT AAGAATAGTA
GCATCAGCAT GGACAGCACC ACCATGGATG AAAGACATTG AAGACTATTA TATTAAACCT
ACAGCGAAAA ATAACCATCA GGGAACAGGT GGGGAATTAA AGCAGCAATA TAGAGCAACG
TATGCTGATT ACCTTATTAA ATACCTTGAT GCCTATAAAA AAGAAGGCAT TGATATTTGG
GGACTAACTC CGGTAAATGA ACCTCATGGT AATAGTGGTC AGTGGGAAAG TATGCATTTC
ACGCCTAAAA CACAAAGTGC TTTTATTAAA GATCATTTGG GACCAAAATT AAAAGTAAGT
GCTCATGAGC AGGTAAAATT ACTCATTTAT GATCAAAATC GTGATGAAAT GGAGCATTGG
ACAGATGAAA TATTAGCGGA TAAAGAAACG GCTCAGTATG TTTATGGTAC GGCGGTTCAT
TGGTATGAAA GTACAAATAA GGTTAACGAA GAAGTCTTTG ACCGCGTTCA TAATAAATTC
CCCGAGTTTT CGATTATTCA CACAGAAGGC ACCATTGATG ATTTAGGTAA AGATGCACCA
GAAGGTATTT TAGATCCCAT CCGATTTAAA GAGTCTAACT GGTTTAATAA TGATAACTTT
TGGTGGAATG AAAATGCGAC CGATTGGGCA TATACCGCGA CATGGGCACC AAAGCCAGAA
GAACACCCAA TTTATACACC AGTGCATCGT TATGCCCGAA ACATTATTGT GAGTTTAGAT
CACTGGCTTG AAGGCTGGAT TGATTGGAAC ATTGTACTCG ATAGTAATGG TGGACCTAAT
CATGTTGGAA ACTTCTGTGG TGCACCGATT ATGATAGATA CTGAAACGGG AGAGGTGTAT
TACACGCCAA TTTATCATGT ACTGGCTCAG TTTAGTCGAA CGATCCGCCC TGGCGATAAA
GCATTGCAAG TAGAAACTCA ATTAGCTGGG CTAGATAGTG ATGCATTGCA TGCAAGTGCG
GCCATGAGTA AAAGCAATTT AGTTAGTACA CAATTGTTAA ACACAACCAA AGCAGCTATT
AACTTTTCAC TACAAATTGG TGATCAATTT GTAGAAGTGT CAATTCCTGC TAATTCTGTT
CAAACAATTC AAGCTCAATT ATAA
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| Protein sequence | MKNKAILIGL ISSITLTGCM FQDQGSQVNN KTKEISYHLS TTSEILLTSE AGAKVSPQPN
LTFQQGKAQG KVITIRPDII KQNILGIGTS FTESSAFVLA HLSKEKRAEV MENIYGEKGA
NFSIARTHIG ATDFAVDGKY SYAPVKDDVA LSSFSIAVDQ DGFKQQDHAG IKDEQFDLLP
MIKQAYEIKS KQSDKDLRIV ASAWTAPPWM KDIEDYYIKP TAKNNHQGTG GELKQQYRAT
YADYLIKYLD AYKKEGIDIW GLTPVNEPHG NSGQWESMHF TPKTQSAFIK DHLGPKLKVS
AHEQVKLLIY DQNRDEMEHW TDEILADKET AQYVYGTAVH WYESTNKVNE EVFDRVHNKF
PEFSIIHTEG TIDDLGKDAP EGILDPIRFK ESNWFNNDNF WWNENATDWA YTATWAPKPE
EHPIYTPVHR YARNIIVSLD HWLEGWIDWN IVLDSNGGPN HVGNFCGAPI MIDTETGEVY
YTPIYHVLAQ FSRTIRPGDK ALQVETQLAG LDSDALHASA AMSKSNLVST QLLNTTKAAI
NFSLQIGDQF VEVSIPANSV QTIQAQL
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