| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3102 |
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| Symbol | pfaC |
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| ID | 3523266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3231913 |
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| End bp | 3237963 |
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| Gene Length | 6051 bp |
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| Protein Length | 2016 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637285553 |
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| Product | polyunsaturated fatty acid synthase PfaC |
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| Protein accession | YP_269800 |
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| Protein GI | 71278985 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATA TTGCCGTAGT AGGTATTGCT AATTTATTCC CAGGATCTTC TGCACCAGAA
GAATTTTGGC AGCAATTGCT GAAGAAACAG GATTGTCGCA GTAAAGCAAC CAAAGAACAA
ATGGGTGTTG ACCCTGAAAA ATACACCGGA AAAAAAGGCG ACACAGATAA ATTTTACTGT
GTGCACGGTG GTTATATTCG AGATTTCAAT TTTGATGCAA CATCATTTAT TCAGAACACT
GCTGGTTTAA CCGCACCGCT GAGTGAAGAG TACCTAAATC AACTAGATGA TCTAAATAAG
TGGGCTTTGT ATGTTACCCA ACAAGCATTA ACCGACGCAG GTTATTGGGG CAGTGATAAG
CTTGAGCAAT GTGGCGTTAT TTTAGGAAAC TTATCGTTTC CAACCAAGTC GTCTAATCAC
TTATTTATGC CGTTGTATCA CCAAGTTGTC GATAACGCAT TAAAAGCCGG TATCGATAAA
GATTTTCAGT TAAGTCATTT TTCTGATACT GATATTTCGA CCAATAATAT TCATGCAGAT
AATGCGCTGG TTGCGGGTTA CCCTGCGGCG CTTTTAGCGA AAGCTGCGGG TCTTGGTGGT
ACACACTTTG CGCTTGACGC AGCCTGTGCA TCAAGCTGTT ATTCGGTAAA ATTGGCTTGC
GATTACTTGC ATACTGGTAA AGCTGACATG ATGCTAGCAG GTGCGGTATC AGGCTCTGAT
CCTATGTTTG TTAATATGGG GTTCTCAATC TTTCAAGCCT ACCCAGCTAA CAATATTCAT
GCCCCGTTTG ATAAAAACTC TCAAGGCTTA TTTGCCGGTG AAGGTGCAGG CATGATGGTA
TTAAAACGCC ATAGTGATGC GGTACGTGAC GGTGATAAAA TTCATGCGAT TATCAAAGGT
GGTGCTTTAT CAAATGACGG TAAAGGTGAA TTTGTTCTTA GCCCAAATAC TAAAGGGCAA
GTGCTTGTTT ATGAACGTGC CTATGAAGAT GCAGCGGTTG ACCCACGTGA TGTAGATTAC
ATTGAATGTC ATGCTACTGG CACACCAAAA GGCGATAACG TAGAACTTGG CTCTATGGAT
ACCTTCTTCA GCCGTTTCCC AAGAGAAAAT GGCAATAAGC CTTTGCTTGG CTCAGTCAAA
TCTAACTTAG GTCACTTACT TACCGCGGCA GGTATGCCGG GTATGACTAA AGCGATTTGG
GCACTTAATG AAGCAAAAAT CCCCGCAACC ATTAACTTAA ACGAGCCATT AAGCTCTAAA
AAAGGTTATT TAGGCGGCGC ACAAATGCCA ACAGATACTA TCGATTGGCC AGTTCCTGCT
AACAGTGCAA ACAAGCCAAG AACCGCTGGT GTCAGTGTAT TTGGTTTTGG TGGCTCTAAT
GCTCATTTAG TTTTACAACA ACCCACACAG CAACTTGAGC CTATTACGGT AAAAGCCAAA
CCACGTGAGC CGCTCGCCAT TATTGGTATG GATGCTCATT TTGGTGGTGC TGAAGATCTT
GCTAGTTTTA AAACACTTAT CGAAACTAAT GATAATACTT TCAGAGAATT ACCGACGAAT
CGTTGGAAAG GCATTGATAA CGATACTGAT GTGATGAATG CCTTGCAGCT TAGTAAAGCA
CCTCAGGGCG GCTATGTTGA AAACTTTGAT ATTGATTTTT TACGTTTCAA AGTGCCACCT
AACGAGCAAG ACTGTTTAAT TCCCCAGCAA CTGATGATGA TGAAAGTTGC TGATAATGCA
GCGAAAGATG CAGGACTTAA AGAAGGTAGC AACGTTGCGG TACTTGTAGC TATGGGTATC
GAACTCGAGC TGCATCAATA CCGAGGTCGC GTTAACTTAA GCACACAAAT TGAAGAAAGT
TTATTACAGC AAGGCGTTAC GCTTAACTCA GAGCAACGTG AAACATTAAC CAATATCGCT
AAAAATGGCG TTGCTCACGC GGCGCAGCTT AATCAATATA CCTCGTTTAT TGGTAATATT
ATGGCGTCAC GTATTTCAGC ATTATGGGAT TTTACCGGTC CTGCGATAAC GCTTTCTGCG
GAAGAAAACT CAGTTTATCG TTGCGTAGAA TTGGCTGAGA ACTTATTCCA AACATCAGAC
ATTGATGCCG TGATTATAGC CTCGGTTGAT TTAGCTGGCT CAGTAGAAAA TATTACCTTA
AGACAACACT TCGGTCCGGT AGAAAAGGGG CAGGTAGAAA CAGGCTCAGT CTCAACAAAT
TCTGCAACCT CAGCAAATGT CCTTGAACAA AATACATGGC GAGTAGGTGA AGGGGCAGGT
GCGTTTGTCG TTAAACCCCT GTCTAAAGTC ATCCAAGTTG CAGAGCAAAG TATTTACGCC
ACCATAGACG GTATTAGTTT TGCCAATGGT AAAGATGCTG CGGCCATCAC TAAGGCCGCA
AGCGCTTCAC TGAACATTGC AGGGCTTAAC AGCGCAGATA TTACGAGTGT TGAAGCACAT
GCCAGTGGTT TTAGTGCTGA AAATATAGCA GAAGCTCAAG CACTACCAGC ATTGTATGCA
GGCAAAGTGA TTAGCAGTGT TAAAAGCAAT ATTGGTCATA CGTTTAATGC CAGTGGTGTT
GCCAGTATTA TTAAAACAGC ACTCTTGTTA GATGATAAAG TGTTGAATGA AGAGCGCTTA
ACCTCTCATG TCGCGTCTCA TATAGCCGTG AATGGCTTAG GTAAAGATGA AAGCTGTGCG
CACCTTATTT TGTCATCGAG CAAGCTAGCC CATCAAGCAG CGCCTCCTCC AACAGGCAAA
CAACGTCCTA AACTAATTAA AAATATTAGT TTAGGTGGCA AGGCCATTTT TGCAGACATC
ATTGCTAACG TTAAAGCACC GGCAATGACG GCGATTAAGC AAGCTTTTAC TAAGCAACCT
TTACGTCAGG TTAAACAGGC GGTTAATGTC ATGAACATTA AACCTAAGCT AACTGAAGCA
AAAGTAGCTG AAGTTAAGTT ATCCCAAGCT GCTCAGCCAA CTAATTTATC TAGTCAAGCT
CACACACGAT CAACGGTCGT TACCGGAGTA AAAGTGAAGA AAGTTACTAA TACTGCTATT
GCAAATAACC AAAGCAAGAG GCAAGTACCT GCAGATGTTA AACATCAAGC AAGTAAAGAA
ATTTTCCAAG AATCAGCTAC ACATCAAGCC TTTTTAAATA CTCGCCAAAT GGCAGGTCAG
CAGATTTCGA AATTGATTGA AATGCAAGCT AATGTCAGTG CAGGGTTGCC GACTTATGTT
TCAACAACAA GCGCAGCTGA GCCGGTAAAT GAACGTCAGC ATGCACCTGA GCTTTCGGTT
GTTTCTTCAA ATGTACAAGC GGAAAACCAG CAGTGGGCAA ATGAATCTGG TTTTAAAATC
AAAGGCCCAG CAGGATACAG CTACCCACCA TTACAACTTG AAGAGCGCTT TAATAAACCC
GAAGAAATTA TTTGGGATAC TGCCGATTTA GTTGAATTTG CTGAAGGTGA TATCGCGAAA
GTTTTTGGTG ATGAGTTTAA AATCATCGAC AGTTATTCAC GTCGTGTACG TTTACCGACC
ACAGATTATT TATTAGTTTC ACGTGTTACC GAGCTTGAAG CTACGGTAAA TGAATATAAA
AAATCATACA TGTGCACTGA GTATGATATT CCCGTTGATG CGCCGTTCCT TATCGATGGT
CAAATTCCTT GGTCAGTATC GGTTGAATCA GGACAATGTG ATTTATTATT AATTTCTTAT
ATTGGTATTG ATTTTCAAGC CAAAGGCGAA CGTGTTTATC GTTTACTTGA TTGTGAATTA
ACCTTCTTAG AAGAAATGGC CTTTGGTGGT GAAACACTGC GTTATGAAAT TCATATCGAC
TCATATGCAC GAAACGGCGA GCAATTATTA TTCTTCTTTC ACTACGATTG TTATGTTGGT
GATAAAAAAG TATTAATCAT GCGTAATGGT TGTGCTGGTT TCTTCACTGA TGAAGAACTT
GCTGATGGCA AAGGCGTTAT CTTAAATGAT AAAGATAAAG CAGAATTAGC TAATGCCGTT
AAAAGTGATT TTGCACCATT AATAACTAAT ATTGATGCAG CGAAACAAGC CAAACAGCAT
TTCGATTACG TTGACATGAT GAAATTGGTT GATGGTGATG TTGCAGGTTG TTTTGGTGAA
GAATATAACC AACAAGGTCG TAATCCGTCA TTAAAGTTCT CGTCTAAGAA ATTCTTAATG
ATAGAGCGCA TTACTAAGAT TGATGCAAAA GGCGGTCATT GGGGCTTAGG CTTACTAGAA
GGTCAAAAAG ACTTAGACCC ACAGCATTGG TATTTCCCAT GTCACTTTAA AGGTGACCAA
GTGATGGCCG GCTCATTAAT GAGTGAAGGT TGTGGTCAAA TGGCGATGTT CTTAATGCTT
AAATTAGGCA TGCACGCTAA TGTAAATAAC GCACGCTTTC AGCCTATGCC AGGTGAGTCG
CAAACCGTAC GTTGTCGTGG CCAAGTACTT CCGCAGCACA ATACGTTAAC GTATCGCATG
GAAGTAACCG CAATGGGCAT GACTCCTTAC CCATTCTTAA AAGCGAATAT CGAAATTATT
CTTGATGGTA AAGCGGTTGT TGATTTTAAA AACTTATCAG TGATGATCAC TGAACAAGAT
GATAACTCGC CATATCCGGT AACTTTACCT GACAATGTTC AGCTTCAACA AAGCAAGGTG
CAACCAGTAA CAAATGCCGA AGTTAAAAGT GCAGACACCA ATCTTGAACT AGATGAACGT
GGTGTAGCGC CATTTAAACA CCCTGAACGT GCTTTAATGA AAGTTGTGTC TGATTTGATC
GCGCCAAAAG AGAAGGGCGT AACACCAATT CAACATTTTG AAGCGCCAAT GGTAGCTGGT
CAAAACCGCG TACCTAACCA AGCACCGTTT ACACCTTGGC ATATGTTTGA ATTTGCTACC
GGTAATATCT CTAAATGTTT TGGTCCTGAT TTTGACGTGT ATAAAGGTCG TATTCCTCCA
CGTACACCCT GTGGTGATTT ACAAGTCGTA ACACAAGTTG TCGAAGTGCA AGGTGAGCGT
TTAGATCTTA AAAAGACTTC TAGCTGTATC GCAGAATACT ATGTGCCGAG TGATGCATGG
TATTTCACTA AAAACAGCGT TAATAACTGG ATGCCTTATT CATTAATCAT GGAAATTGCC
TTACAACCGA ATGGCTTTAT TTCAGGTTAC ATGGGCACCA CACTTAAATA CCCAGAAAAA
GATTTATTCT TCCGCAACCT TGATGGCAGC GGTGACTTAA TCAAACAGGT AGATTTACGT
GATAAAACCA TTGTTAATAA ATCGGTATTA TTAAGCACTA CCATGGCTGG CGGTATGATA
GTACAAAGCT TCACTTTTGA GCTGTATGTG AAAAATGAAA GTGCTGCTGC TCAGTCATTA
GAAAGTCATG ACTTGTTCTA CAAAGGTACG GCCGTTTTTG GTTACTTTGG TGCAGATGCG
TTAACGAACC AATTAGGTAT TGATAACGGT AAAGTAACGC ACCCTTGGTT TGTTGATAAC
AATACTCCTA AATCAGACAT TAAGGTGATC GATCTTAGTA ATTCTAATCT GCCTTTATAC
CAAGCGCCAT CGAACAAACC GCATTACAAA TTAGCGGGTG GTCAAATGAA CTTTATTGAT
ACCGTTTCAA TCGTTGAAGG CGGCGGTAAA GCGAGTATTG CTTATGTACA CGGCGAACGA
ACTATTGATG CAACAGACTG GTTCTTCCGT TATCACTTCC ACCAAGATCC GGTAATGCCT
GGCTCATTGG GTGTTGAAGC GGTTATCGAA TTAATGCAAA CCTACGCATT AGAAAATGAT
TTAGGTAAGC AATTTACTAA CCCAAGATTT ATTGCACCGG CAACCCTAGT TAAATGGAAA
TATCGTGGTC AAATTACGCC ATTAAACAAA CAGATGTCTC TTGATGTGCA TATTACAGAC
ATCATTAAAG AAGACGGTGA AGTGAGATTA GTCGGCGATG CTAACTTATC GAAAGATGGC
TTACGTATAT ACGAAGTAAA AGATATTGTC CTGTCGCTTG TTGAAGCATA A
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| Protein sequence | MENIAVVGIA NLFPGSSAPE EFWQQLLKKQ DCRSKATKEQ MGVDPEKYTG KKGDTDKFYC
VHGGYIRDFN FDATSFIQNT AGLTAPLSEE YLNQLDDLNK WALYVTQQAL TDAGYWGSDK
LEQCGVILGN LSFPTKSSNH LFMPLYHQVV DNALKAGIDK DFQLSHFSDT DISTNNIHAD
NALVAGYPAA LLAKAAGLGG THFALDAACA SSCYSVKLAC DYLHTGKADM MLAGAVSGSD
PMFVNMGFSI FQAYPANNIH APFDKNSQGL FAGEGAGMMV LKRHSDAVRD GDKIHAIIKG
GALSNDGKGE FVLSPNTKGQ VLVYERAYED AAVDPRDVDY IECHATGTPK GDNVELGSMD
TFFSRFPREN GNKPLLGSVK SNLGHLLTAA GMPGMTKAIW ALNEAKIPAT INLNEPLSSK
KGYLGGAQMP TDTIDWPVPA NSANKPRTAG VSVFGFGGSN AHLVLQQPTQ QLEPITVKAK
PREPLAIIGM DAHFGGAEDL ASFKTLIETN DNTFRELPTN RWKGIDNDTD VMNALQLSKA
PQGGYVENFD IDFLRFKVPP NEQDCLIPQQ LMMMKVADNA AKDAGLKEGS NVAVLVAMGI
ELELHQYRGR VNLSTQIEES LLQQGVTLNS EQRETLTNIA KNGVAHAAQL NQYTSFIGNI
MASRISALWD FTGPAITLSA EENSVYRCVE LAENLFQTSD IDAVIIASVD LAGSVENITL
RQHFGPVEKG QVETGSVSTN SATSANVLEQ NTWRVGEGAG AFVVKPLSKV IQVAEQSIYA
TIDGISFANG KDAAAITKAA SASLNIAGLN SADITSVEAH ASGFSAENIA EAQALPALYA
GKVISSVKSN IGHTFNASGV ASIIKTALLL DDKVLNEERL TSHVASHIAV NGLGKDESCA
HLILSSSKLA HQAAPPPTGK QRPKLIKNIS LGGKAIFADI IANVKAPAMT AIKQAFTKQP
LRQVKQAVNV MNIKPKLTEA KVAEVKLSQA AQPTNLSSQA HTRSTVVTGV KVKKVTNTAI
ANNQSKRQVP ADVKHQASKE IFQESATHQA FLNTRQMAGQ QISKLIEMQA NVSAGLPTYV
STTSAAEPVN ERQHAPELSV VSSNVQAENQ QWANESGFKI KGPAGYSYPP LQLEERFNKP
EEIIWDTADL VEFAEGDIAK VFGDEFKIID SYSRRVRLPT TDYLLVSRVT ELEATVNEYK
KSYMCTEYDI PVDAPFLIDG QIPWSVSVES GQCDLLLISY IGIDFQAKGE RVYRLLDCEL
TFLEEMAFGG ETLRYEIHID SYARNGEQLL FFFHYDCYVG DKKVLIMRNG CAGFFTDEEL
ADGKGVILND KDKAELANAV KSDFAPLITN IDAAKQAKQH FDYVDMMKLV DGDVAGCFGE
EYNQQGRNPS LKFSSKKFLM IERITKIDAK GGHWGLGLLE GQKDLDPQHW YFPCHFKGDQ
VMAGSLMSEG CGQMAMFLML KLGMHANVNN ARFQPMPGES QTVRCRGQVL PQHNTLTYRM
EVTAMGMTPY PFLKANIEII LDGKAVVDFK NLSVMITEQD DNSPYPVTLP DNVQLQQSKV
QPVTNAEVKS ADTNLELDER GVAPFKHPER ALMKVVSDLI APKEKGVTPI QHFEAPMVAG
QNRVPNQAPF TPWHMFEFAT GNISKCFGPD FDVYKGRIPP RTPCGDLQVV TQVVEVQGER
LDLKKTSSCI AEYYVPSDAW YFTKNSVNNW MPYSLIMEIA LQPNGFISGY MGTTLKYPEK
DLFFRNLDGS GDLIKQVDLR DKTIVNKSVL LSTTMAGGMI VQSFTFELYV KNESAAAQSL
ESHDLFYKGT AVFGYFGADA LTNQLGIDNG KVTHPWFVDN NTPKSDIKVI DLSNSNLPLY
QAPSNKPHYK LAGGQMNFID TVSIVEGGGK ASIAYVHGER TIDATDWFFR YHFHQDPVMP
GSLGVEAVIE LMQTYALEND LGKQFTNPRF IAPATLVKWK YRGQITPLNK QMSLDVHITD
IIKEDGEVRL VGDANLSKDG LRIYEVKDIV LSLVEA
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