| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2958 |
|---|
| Symbol | |
|---|
| ID | 3518866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3100465 |
|---|
| End bp | 3101352 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637285411 |
|---|
| Product | ISCps3, transposase orfB |
|---|
| Protein accession | YP_269658 |
|---|
| Protein GI | 71278532 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0431063 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAACGG TTTCTTGCAG AGGAACATCA AGTCGATATC GATTCATCGA AAAACTCAGA
GCCGACATAA AAGTTACGCG ATTACTGACG TTTTTTGATG TATCTAAAAG TGGTTATTAT
GACTGGCGTG AGCGCCAACC GAGTGCTATA GCCATAGAAG ATGTTGAGCT TAAACATAAA
ATACAGCAAA TTTTCAAAGA GAATATAGGA CGATATGGGA GCCCTCGAAT ATTTAAGGCC
TTACAAAAGC AAGGGTACAA CATAGGTAAA AAACGTGTCG AACGTTTGTA TCGTGCGCTT
GGTTTGGTTG CCAGAGTGAT GCGCGTGACG ACACGTTCAG CCTTTTATAA ACGCTTCCTA
ACGACAGGTA AAAACTTACG ACCTGATGGC GAAGTCCCAT TGGCTAAAGA TAAGGTCTGG
GTAGCTGATG TCACATATTT GAAAGTTAAA GGCGTATGGC GTTATTTGTC GGTCATCATG
GATTTATATT CACGGCGCAT TATTAGCTGG AGTTTGGATA AAAGTAGGAC GATGGAAGTG
ACCAAGCGTA CATTGCAAAA TGCAGTTAAG AAACGCAAAC CATCCGGTGA CTTAATGCTC
CACACTGATA GAGGCGTAGA ATATCGTGGG CACATTTACC AGAAAGCATT GAAACGACAT
GGGATCACTC ATAGTTTGAG TAGAGCTGGA AAATGTACTG ATAATGCGCA TATGGAGTCA
TTTTTCCATT CAATGAAGAC GGAAGTTATT CGTGGTAATG TGTTTAAAAG TGATAAAGAA
CTGCGCGGAA CACTTGGCAA CTACATTAAC AAATACTACA ATGTTTCGAG GATGCATTCA
GGGATAAACT ATTGTTCTCC AATAGAATAT GAAGCCCTGG CAGCGTAA
|
|---|
| Protein sequence | MATVSCRGTS SRYRFIEKLR ADIKVTRLLT FFDVSKSGYY DWRERQPSAI AIEDVELKHK
IQQIFKENIG RYGSPRIFKA LQKQGYNIGK KRVERLYRAL GLVARVMRVT TRSAFYKRFL
TTGKNLRPDG EVPLAKDKVW VADVTYLKVK GVWRYLSVIM DLYSRRIISW SLDKSRTMEV
TKRTLQNAVK KRKPSGDLML HTDRGVEYRG HIYQKALKRH GITHSLSRAG KCTDNAHMES
FFHSMKTEVI RGNVFKSDKE LRGTLGNYIN KYYNVSRMHS GINYCSPIEY EALAA
|
|---|
| |