| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2658 |
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| Symbol | |
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| ID | 3520428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2770110 |
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| End bp | 2771309 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637285112 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | YP_269372 |
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| Protein GI | 71279965 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.919133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAT TTAAAGCATT TTCACTTTTA GAGTCAATTA TTGACCGCGT TAATCTTAAA
GGCTACAAAC AGCCAACACC GATCCAAAAA GAATGTATCC CAGCGCTTAT AAATGGCAAT
GATCTTCTTG GTATAGCGCA AACGGGAACA GGAAAAACTG CGGCCTTTTC ATTGCCTATT
ATCAATAAAT TTGGGCGAAA TAAAATTGAT ATTAAAGCTA AGAGCACGCG CTCGCTCATA
CTAACGCCCA CAAGAGAGCT TGCCTCGCAA ATAATGCAAA ACATTGATGA CTACTCTGAT
GGCTTGGGGC TTAAAACTAA GGTTGTTTAT GGTGGTGTAG GAAGACAAGC TCAAGTTGAC
TCTATCGAAC TTGGACTTGA TATTTTAGTG GCCACCCCTG GAAGGTTATT GGATTTAATT
GAAACGGGCG ATATAAATTT CAAGGCGTTA GAAGTATTTG TGTTAGATGA AGCAGATACA
ATGCTTGATA TGGGATTCTT TAAGGATGTT CAAAGTATCA TATCGAAACT GCCAAAGAGC
CGACAAACAC TATTATTTTC AGCTACTATG CCTGCGGAAA TAGAGATACT TGCAGAAGCC
ATATTAACGG ACCCAACAAA AATTCAAATT ACTGCTGAAA CGGTTACTAT CGACTTGGTT
AATCAAAGTG TGTACCACCT TGATAAATCG AATAAAGTAC CCTTGCTATT TAATATCCTG
ACAAAAGCTG ACTATGAAAA AGTGCTCATC TTTTGTAAAA CAAAGTATGG CGCTGACATC
ATTGTTAAAG CACTAGAAAA GGCATCAATA ACTGCCGCTA GCCTGCACAG TGGTAAAACA
CAAGCAGTTA GGGAGGAAGC GTTACAAAAC TTTAAAGACT CTACTTTAAG AGTATTAGTT
GCAACTGATG TTGCTGCTCG TGGAATTGAT GTTGATAATA TTACGTTAGT CATTAACTAT
AACCTTCCTG AAGATCCAAG AAACTACATA CACCGTATAG GACGAACTGC TCGTGCCGGG
AAAAGTGGTA TGGCTATTTC ATTTGCTGTA GAAAATGATA TAAGGCAATT AACTAATATT
GAAAATAGCA TAGGGCAAGT CATTCCTGTT GTTACAGAAC AGCCTTTCCA TAAAGAGTTT
TCAAAAGCGC CTATACAAGA CAAGAAAAAG AAACAGGTTA AAAAAACAAA GAGAAAATAA
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| Protein sequence | MSEFKAFSLL ESIIDRVNLK GYKQPTPIQK ECIPALINGN DLLGIAQTGT GKTAAFSLPI
INKFGRNKID IKAKSTRSLI LTPTRELASQ IMQNIDDYSD GLGLKTKVVY GGVGRQAQVD
SIELGLDILV ATPGRLLDLI ETGDINFKAL EVFVLDEADT MLDMGFFKDV QSIISKLPKS
RQTLLFSATM PAEIEILAEA ILTDPTKIQI TAETVTIDLV NQSVYHLDKS NKVPLLFNIL
TKADYEKVLI FCKTKYGADI IVKALEKASI TAASLHSGKT QAVREEALQN FKDSTLRVLV
ATDVAARGID VDNITLVINY NLPEDPRNYI HRIGRTARAG KSGMAISFAV ENDIRQLTNI
ENSIGQVIPV VTEQPFHKEF SKAPIQDKKK KQVKKTKRK
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