Gene CPS_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1800 
Symbol 
ID3519301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1852322 
End bp1852753 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content39% 
IMG OID637284263 
ProductISCps10, transposase 
Protein accessionYP_268531 
Protein GI71279216 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.715087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGATT ATAGGAGTTT GTCCCATACA GGATGGGATT GTAAATACCA TATTGTATTT 
ATACCTACAA AAAGACGCAA AATGATATTT GGTTCAATCA GAAAACATTT AGGGGAAGTG
TTCCATGAGT TGGCTCGTCA AAAATGCGTG ATTATTGAGG AGGGACACTT AATGCCAGAT
CATGTTCATA TGTGCTTGAG TATTCCACCG AAGTTAGCAG TTTCCAATGT TGTTGGTTTT
ATAAAGGGAA AAAGTGCGAT CTCAATAGCG AGAACATTTA AAGGAAAGCA AAGAAACTTT
ACTGGTGAAG CATTTTGGGC TAGAGGATAT TTTGTATCCA CGGTTGGGCT TGATGAAAAT
ATGGTGAGGG AATATATCCG TAATCAAGAA AAACAGGACG TAGAGCGGGA TCAGCTGAAG
TTGGGGGGTT AA
 
Protein sequence
MRDYRSLSHT GWDCKYHIVF IPTKRRKMIF GSIRKHLGEV FHELARQKCV IIEEGHLMPD 
HVHMCLSIPP KLAVSNVVGF IKGKSAISIA RTFKGKQRNF TGEAFWARGY FVSTVGLDEN
MVREYIRNQE KQDVERDQLK LGG