Gene CPS_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0548 
Symbol 
ID3519559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp545636 
End bp546196 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content34% 
IMG OID637283013 
Productacetyltransferase 
Protein accessionYP_267306 
Protein GI71277959 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAGTT TTACCACTGA ACGATTAATG ATAAGACCGT TAAGAGCAGA AGATGAAGTA 
TTTTACTGCC AGCTATATGC TGACTCAAAA GTAATGGAAA ACATTGGTAA AACCATAACA
AAAAAGCAGG CCCGTCAATG GTTCAAGCGG GCATTAAAAG CATTGTCCAG CCCTAAAAAA
TCAGTTGTTA CCCTAGCAAT AGTTAAGAAA TCTACAAATA ATATAATTGG TATTCAAGCA
TTATCTTGGC AAAATACTAC TCAAATACTA AAACCCTGTA GTCAAAAGCT TGTACAAGCA
GAAATTGGTA TTATGTTAAC GACCAAAGCA CAAGGTCAAG GTTTCGGCAA AGAAGCGATA
AAGGCTTTAA TGGCATATGG CTTTGTCTAC CATTCCCTTG ATAGGATCAA TGCTTTTTAT
GCTAAGAAAA ACTTAGCTTC AGAAAGACTT TTCAATAGTC TACATTTTAT TTATGACCTT
AGTGCACAAA ACTGCAACTC TCAGAATAGC TACCAATACT TTAATAGCCC TCAATTACGT
AAAAATATAA TATCTAAGTA A
 
Protein sequence
MYSFTTERLM IRPLRAEDEV FYCQLYADSK VMENIGKTIT KKQARQWFKR ALKALSSPKK 
SVVTLAIVKK STNNIIGIQA LSWQNTTQIL KPCSQKLVQA EIGIMLTTKA QGQGFGKEAI
KALMAYGFVY HSLDRINAFY AKKNLASERL FNSLHFIYDL SAQNCNSQNS YQYFNSPQLR
KNIISK