10 homologs were found in PanDaTox collection
for query gene CPS_0533 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003910  CPS_0533  hypothetical protein  100 
 
 
176 aa  365  1e-100  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2202  hypothetical protein  35.96 
 
 
187 aa  96.3  2e-19  Shewanella baltica OS185  Bacteria  hitchhiker  0.00975058  n/a   
 
 
-
 
NC_009052  Sbal_2169  hypothetical protein  34.83 
 
 
187 aa  95.9  3e-19  Shewanella baltica OS155  Bacteria  normal  0.0130595  n/a   
 
 
-
 
NC_009997  Sbal195_2310  hypothetical protein  36.36 
 
 
187 aa  95.5  3e-19  Shewanella baltica OS195  Bacteria  normal  0.0760815  normal 
 
 
-
 
NC_011663  Sbal223_2205  hypothetical protein  35.23 
 
 
187 aa  94.4  7e-19  Shewanella baltica OS223  Bacteria  normal  0.10984  normal  0.438843 
 
 
-
 
NC_008321  Shewmr4_1976  hypothetical protein  35.09 
 
 
176 aa  90.1  2e-17  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0011077  normal  0.308944 
 
 
-
 
NC_008322  Shewmr7_1998  hypothetical protein  34.5 
 
 
176 aa  87.8  7e-17  Shewanella sp. MR-7  Bacteria  normal  0.0693742  unclonable  0.0000181404 
 
 
-
 
NC_008577  Shewana3_2063  hypothetical protein  32.95 
 
 
176 aa  82  0.000000000000004  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000155874  hitchhiker  0.00000857525 
 
 
-
 
NC_013440  Hoch_2504  hypothetical protein  31.18 
 
 
173 aa  81.6  0.000000000000005  Haliangium ochraceum DSM 14365  Bacteria  normal  0.503819  normal 
 
 
-
 
NC_009719  Plav_0034  hypothetical protein  26.55 
 
 
200 aa  65.5  0.0000000004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.953249  normal 
 
 
-
 
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