Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0533 |
Symbol | |
ID | 3519363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 531016 |
End bp | 531546 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637282998 |
Product | hypothetical protein |
Protein accession | YP_267291 |
Protein GI | 71279122 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAATATG CATTACAAGA AGTTAAAACC CAAGCAAAGA AGTTATTAAA AGCATTGAAG TTAGATCCAA GCTTAGTCAG AGCTATGCAA ATACCTTTAA AGAAAATTGC CATATCATCA CCCGAGGCGT TACAGCTAAA ACATTGCCTA GGACTGGTTT CAATGGAGCT AGGTTTTAAA GATTGGCATG AAGCTCAACA GCTTTTATCT GGTAGTAAAT CGCAATTGAT GATGATAAAC ATGGGTAGCT TTTTTTACCC CAAAGGCTGT GGTGGTTTTA TTAATGAATG GTTTGCCGAT TACTCTCAAG CTAGAAACAC CTTGGTTAAC AGTCCGACGT CAAAATGGCT GTTGCCTTAT AAAAATCAAT TTATTGTCGT AGAGAAAGAC TATATTGAAG TGTTTAAGCT AGATAAAGCG CTATTATCAT CTTGGGCAGA GATAGAGCAT GACATGGTGG CTAGTTATAA TAGTGTAGCT TGGGATAAAA TAACCTGTGC TGTGATTAGG AATAGACTGA AAGACTATTA A
|
Protein sequence | MEYALQEVKT QAKKLLKALK LDPSLVRAMQ IPLKKIAISS PEALQLKHCL GLVSMELGFK DWHEAQQLLS GSKSQLMMIN MGSFFYPKGC GGFINEWFAD YSQARNTLVN SPTSKWLLPY KNQFIVVEKD YIEVFKLDKA LLSSWAEIEH DMVASYNSVA WDKITCAVIR NRLKDY
|
| |