| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0309 |
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| Symbol | |
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| ID | 3520375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 316424 |
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| End bp | 319168 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637282774 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_267075 |
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| Protein GI | 71279913 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02917] putative PEP-CTERM system TPR-repeat lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTG TAAAAGCCTC TCTCTATTTA AGTATCGCGC TGGCAATATC GGCTTGTGGT
GAACAAGTCT CTGTTGAATC TCATTTAGAA AATGCAAAAA GCTATCTAAA TGAAAACAAA
GTTAATGAAA GTATTATTGA ATTAAAAAAT GCTATTCGAG CTGATACTAA AAATGCTGAA
GCACGTTTTT TGTTAGGTCA AATTTATTTA AGTTTAGGTG ATGGTCTTGC TGCGGTTAAA
GAGCTGGAAC GAGCGCAATC ATTAAAATAT CCGGATAACA AAGTTCTACC CTTACTAGCA
CGAGCCTATA TCTTAACTGA CAGTGATAGT GATGTAATCG CATTAAGTAC TGCAGCTAAG
GGACTCGCTG CTGAAGAAAG AAGTCAATAT TTAGCCTACC AAACACTAGC GGCGCTACGT
AGTGAACAAC CAGACTTAGC CAAGCAAAGT GTTGAATTAG CGCAGTCAAT TGCCCAACAA
AGTCTTTATA GTATGCTGGC CTCGGCGTAT CTTCAGTTAT CAGAAAATAA ATATGATGAA
GTGAAAACAC TTATCTCGAG AATTCTAACT ATAGAGGCTA AGCAAGTTGA TGCGCTGATG
TTGCAGGGGC AAGTAGCTAT GGTCACTGAA GAATATCAAC TGGCAGTAGA TAGCTTTAAG
CAGTATATGG AGTTACAACC TCGATTTTCA ATGGTGGAAT TATTATTAGC TAATGCATTA
CTTAAAGCGG GCCATGATGA GGAAGCTGAA CAACATGCAG ATGCTATATT AGCTAAAGTT
AATAACCAAC CTTTTGCTAA CTATATCAAA GCTATGGTGC GCTTTCAGGC AAAAGACTTT
GACAAAGCTA GTGAGCATGC TGAGGCGGCA TTATCGGCAG ACTTTAATCA ATTTAATTTA
AAATTAGTGG CAGGAGCGAG TGCTTTTTAT CTTAAAAATT GGCAGCAAAG TTATCATCAT
TTAAGTGCTA TTGTTAAGTA CCTACCTAAT GATCACCAAG CTCGTCGTAT GCTTGCGGTT
ACTCAGTTAG AATTAGGGTT AATTGATGAG ATTAGTGCCA CTATTGGTGA TTTTGATGGT
AATGATGAGG TTAACTCTCA ATTTTTATCT TCTTTAAGTT ATAAGCTATT AGAATTAGGG
GCGACTACAG AAGCTAAGAA ATTACTTGCT CAAAATGGTC AAAACAGCTC AAAGAATGCA
GCACATAATG CCCGCCAAGG TATTTTAAAG TTAATGATGA ACGATCCTTC AGGTATAGAG
AATTTACAAG ATGCAGTAAA ACTCAACCCT GAGCTTATTG AAGCAGAATT AGCAATAGCA
TTTTCCGCAT TGCAAAGAGG TGATATCGCT AAGGCTAATG CCATTGCTGA AAAATGGCAA
AAGCAATACC CGGACAAAGC TAGTAGTTTT AATTTATTAG CCAGTATTGC AATAAAAGAA
GGGAAGTATG ATAAAGCAGA ACAAGCACTT AAGAAAAGTT TAAGTTTAGA GCAAGACAAT
TTTTTTGCAC TGACCGAACA ATTACGTATT GCTCGCAAAC AAGAAAATAT CCCCTTAAGT
AAACAACGTG CTGATTATTT AATAACCATT GCGCCTACAA ATAATAAAGT ATTAAGACAG
TATTTTGGTG TTTATCGCAA TGAGATGGCG TTAGCAAAAC TGACCGCTGC TTATGAACTT
GATAAAACAG ATATTAATAA AGCTATATTA TTATCTGAAG CGATGGTGAG TTTAGGTCAA
TTAAAGCAAG CTGAAAGTAT ACTTGTATCA ATAGCCGATA CTGCAAAGTT ACCTAAGCGT
TATTGGCAAT TATTGTTACT TACCTACAAA AAACAAAAGA ATTTCGAAAA AATACGACCT
ACACTAGAAA AATGGTTGAA AGAGAACCCT TATCACATTG AAGCTGTTGT GCTGTTAACT
GATTTCTATG CGAGCCAAAG AAATTATGAG CGTGCTTTAA CTGTTATTAA ACGCGGACTT
GATAACCATA AGGATAATTT GGTTTTACAG TTAGTTCAAA TGCAGTTATT GCTAAACAAC
AAGCAAATAT CTCCTGCGAA AAGTCTTTAT AAAATTATAG AGAATAAAAA TATTAACGAC
GCACTTAAAC AGGGCCTGCT CGGACGCATA TATCTCCTAG AGGAGGATTA TGTTCAAGCA
TTACCTAAGT TAACCGTTTT TTATCAGACT TATCCGAGCA GTCAAAATGC TATTTATTTA
GCAGGGGCTC ATTTAGGCAA TAAAGATAAT GCCAAGGCAG TAAAAGTGTT AGAGCACTAT
CTGACTATTG ATGCAAACAA TAACCGTATT GAAACAATGC TCGCGGGAAT ATACCTCGAA
AATGATAGTG ATAAGGCTAT TGCTGTCTAT GATGACGTTG TTAAAAAACA ACCGAAAAAT
GTAGTTGCCC ATAACAACCT TGCTTGGTTA TATTTAGAGC AAGATAATAT CAGTAAAGCC
CTAGAACATG CTGAAAAGGC ATTAGAATTG GCACCGCAAA TTGCTAATAT TGTCGATACA
TACGCTAAGG TTTTATTAGG GTCCGGTGAT AAAAGAGCGG CCTTGCAATA TGCAAGTAAA
GCTTCTGAAA TAGCCAAAGG GAAGGACGTT GATATTCAAT TGAATTATGT TGAAGCACTT
ATTGCTAATA ATCGAATAAA TGAAGCAAAA GATTTATTAG CTAAAGTTGC TACCGCAACA
GATGAGCAGA AAAATAAAAA ATCAAAACTA CTAGCGCAAT TATAA
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| Protein sequence | MKFVKASLYL SIALAISACG EQVSVESHLE NAKSYLNENK VNESIIELKN AIRADTKNAE
ARFLLGQIYL SLGDGLAAVK ELERAQSLKY PDNKVLPLLA RAYILTDSDS DVIALSTAAK
GLAAEERSQY LAYQTLAALR SEQPDLAKQS VELAQSIAQQ SLYSMLASAY LQLSENKYDE
VKTLISRILT IEAKQVDALM LQGQVAMVTE EYQLAVDSFK QYMELQPRFS MVELLLANAL
LKAGHDEEAE QHADAILAKV NNQPFANYIK AMVRFQAKDF DKASEHAEAA LSADFNQFNL
KLVAGASAFY LKNWQQSYHH LSAIVKYLPN DHQARRMLAV TQLELGLIDE ISATIGDFDG
NDEVNSQFLS SLSYKLLELG ATTEAKKLLA QNGQNSSKNA AHNARQGILK LMMNDPSGIE
NLQDAVKLNP ELIEAELAIA FSALQRGDIA KANAIAEKWQ KQYPDKASSF NLLASIAIKE
GKYDKAEQAL KKSLSLEQDN FFALTEQLRI ARKQENIPLS KQRADYLITI APTNNKVLRQ
YFGVYRNEMA LAKLTAAYEL DKTDINKAIL LSEAMVSLGQ LKQAESILVS IADTAKLPKR
YWQLLLLTYK KQKNFEKIRP TLEKWLKENP YHIEAVVLLT DFYASQRNYE RALTVIKRGL
DNHKDNLVLQ LVQMQLLLNN KQISPAKSLY KIIENKNIND ALKQGLLGRI YLLEEDYVQA
LPKLTVFYQT YPSSQNAIYL AGAHLGNKDN AKAVKVLEHY LTIDANNNRI ETMLAGIYLE
NDSDKAIAVY DDVVKKQPKN VVAHNNLAWL YLEQDNISKA LEHAEKALEL APQIANIVDT
YAKVLLGSGD KRAALQYASK ASEIAKGKDV DIQLNYVEAL IANNRINEAK DLLAKVATAT
DEQKNKKSKL LAQL
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