Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2655 |
Symbol | ssb |
ID | 4204861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2881154 |
End bp | 2881606 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642567203 |
Product | single-strand binding protein |
Protein accession | YP_699890 |
Protein GI | 110801910 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000211835 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAG TAGTTTTAAT TGGTAGACTT ACTAAAGATC CAGAGCTTAG ATTTGCAGCA GGAAGCGGTA CAGCAGTTGC AAGATTTACA CTAGCTGTAA ATAGACAATT CAAAAAAGAT GAAGCTGATT TTATCAGTTG CATAGCTTTT GGAAAAACTG GTGAGACCAT AGCTCAATAT ATTACTAAAG GCAGACAATT GGCTGTTTCA GGAAATATAA GAACTGGAAG TTATGAAGCT CAAGATGGAA CTAGAAGATA TACTACTGAC GTAGTTGTTG AAAGTTTTGA CTTTATCGAT TCAGGAAATG GCGGAGCAAG AGGAAACTCA GGCTTTGGTT CAGGAAATGA TTTCGGTGGT TCTTTCGGTA TGCCAGACAA TTCATTTAGT GATTCATCAT TCAATAGTAA TGATGATATG ACACCAATTG ATGATGGAGA CATTCCATTC TAA
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Protein sequence | MNKVVLIGRL TKDPELRFAA GSGTAVARFT LAVNRQFKKD EADFISCIAF GKTGETIAQY ITKGRQLAVS GNIRTGSYEA QDGTRRYTTD VVVESFDFID SGNGGARGNS GFGSGNDFGG SFGMPDNSFS DSSFNSNDDM TPIDDGDIPF
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