| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2514 |
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| Symbol | |
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| ID | 4204272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2732100 |
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| End bp | 2733491 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642567064 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_699761 |
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| Protein GI | 110803478 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGTT TTAAAAATAA AGAATTCTTA CCTACTATGA TAATGATGGC TATTCCTATA
ACAATTCAGA GTTTTATTAC ATCATCATTG AATCTAGTGG ATAATTTAAT GGTAGGAAAG
CTAGGAGAAG AGTCAATAGC CTCAGTTGGA TTAGCTAATC AATATATATT TATTTTTACC
TTATGTATTC TTGGGATAAA TGCTGGAGCT AGTGTTTTCA TGTCTCAGTT TTGGGGCAAA
AAAGATTTGA AAAATATTAA AAAAGTTTTG GGACTAGATA TATCTATTGG ACTTATAGTT
TCAACTCTTT TTGCCTTAGG TTCTGGATTT TTTTCTTATG AAATTATGGA GATTCTTTCT
AATGATTTAA ATGTTATAGA ATTAGGAGCT AAATATCTAC AGATTGTTTC TGTAAGTTGT
ATATTTACTA ATTTTACTCA AGCTTATTCT TCAGCTTTAA GAAGTACAGA GCAACCTAGT
GTTCCTATGT ATGCAAGTAT AGTTGGAGTC TTGATAAATG CATTTTTAAA CTGGGTATTT
ATATTTGGAA ATTTAGGATT TAAGCCTATG GGGGTTAATG GCGCAGCTTT AGCAACCACT
ATTGCAAGAT TAGTAGAGAT GATATTTATA GTTTCCTTTG TTTATTTTAG AAAGAATAAG
GTGGCATCAA GATTAAATGA GCTTATATCC TTTGATTTAA ATTTCGTAAA AATATACTTT
AGAACATCTT GGTCAGTTAT AGTAAATGAA ATAGTATGGT CTTTAGGTAT GACTGCATAT
TCAATAGCCT ATGCTAGAAT AGGAACAAAC GCTGTTGCTA GTATGCAGAT TGCTACCACA
TTAAATAATA TGTTTATGGT ATTACTAATA GGTTTAGCTA CAGCTTCATC TATAATGATT
GGGAATAAAA TTGGTTCTAA TGAGGAAGAA ATAGCAAGAG AATACGCTAA GGATATAGCT
GTAATAGCTG TTTTAGTAGG ATTTATTTTA GGAATTTTAA TATGGATAAC AGCACCATTA
GCATTAAAGC CTTTTAATGT AAGTGAAGGA ACTTATTTAG ATACAGTTAA AGTTTTAAGA
ATAATAGGAT TGTTCTTTAC AATAAGAGCT TTTAATATGG TTATGATTGT TGGTGTATTT
AGAGGTGGTG GAGATACTAC TTACTCTATG TTAGTACAAT GTGGAACAAT ATGGCTTTAT
GCGGTACCAA TGGCTTTCCT TGGAGCTACA GTATTTTCTT TACCTGTATA TGGAGTGTAT
TTCTTGATTT GTACAGAGGA ATTCTTAAAG ATAATCTTCG AAGCAGTAAG ATTAAAATCG
GGAAAATGGA TAAAGAATGT TATAAGTGAT ATTGAAGAAG ATGAATCTGA TAATAATTTA
ATTACAGTAT AA
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| Protein sequence | MKGFKNKEFL PTMIMMAIPI TIQSFITSSL NLVDNLMVGK LGEESIASVG LANQYIFIFT
LCILGINAGA SVFMSQFWGK KDLKNIKKVL GLDISIGLIV STLFALGSGF FSYEIMEILS
NDLNVIELGA KYLQIVSVSC IFTNFTQAYS SALRSTEQPS VPMYASIVGV LINAFLNWVF
IFGNLGFKPM GVNGAALATT IARLVEMIFI VSFVYFRKNK VASRLNELIS FDLNFVKIYF
RTSWSVIVNE IVWSLGMTAY SIAYARIGTN AVASMQIATT LNNMFMVLLI GLATASSIMI
GNKIGSNEEE IAREYAKDIA VIAVLVGFIL GILIWITAPL ALKPFNVSEG TYLDTVKVLR
IIGLFFTIRA FNMVMIVGVF RGGGDTTYSM LVQCGTIWLY AVPMAFLGAT VFSLPVYGVY
FLICTEEFLK IIFEAVRLKS GKWIKNVISD IEEDESDNNL ITV
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