Gene CPR_1326 details

Gene Information

• Locus tag: CPR_1326
• ID: 4205596
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 1496820
• End bp: 1497494
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 642565880
• Product: amino acid ABC transporter ATP-binding protein
• Protein accession: YP_698646
• Protein GI: 110803356
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1126] ABC-type polar amino acid transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00202855
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAAAA TAAAAAACTT AGAGAAATCC TTTAAGGGTA ATAAAATATT AGAAAACATC 
TCCTTTACTC TTAAAGAAGG AGAAATATTA ACCTTACTAG GCCCCTCTGG AGCTGGTAAA 
ACAACAATAC TTAGAATTTT AAATGGACTT GAAACCTGTG ACTTTGGAGA TATAACCTTA 
GATTCTTTAA AAATTTGCGA GAAGGGAATA TATAAAGATT TCAAAGCACA AAAGGAAATT 
CATAAAAAAA TAGGACTAGT ATTTCAAACC TTCAATCTTT TTCCTCATAT GAATATTTTA 
GAAAACTTAA TTTTAGCTCC AATGCACACT CTAAACCTCT CTCTAGAAGA GGCTACTAAA 
AAAGCATTAC AAATTCTTTC TAAACTTTCT TTAGAGGATA AAGCTAAATC TTACCCTTGT 
GAACTATCAG GTGGGCAAAA ACAAAGAGTT GCTATTTCTA GAGCTTTAAT GTTAAACCCT 
AAATATATAT GTTTTGATGA ACCTACCTCA GCCTTAGACC CATCTTTAAC TAAGGATGTT 
TCAAATATTA TAAAATCCTT AGCTAAGGAA AATATTGGGG TATTAATAAT AACTCATGAT 
ATGGAATTTG CAAAAGAAGT GTCTTCAAGA ATTATAAAAT TAGATTCTAG GAAAATATTA 
GATGATATAT CTTAA 

 

Protein sequence

MIKIKNLEKS FKGNKILENI SFTLKEGEIL TLLGPSGAGK TTILRILNGL ETCDFGDITL 
DSLKICEKGI YKDFKAQKEI HKKIGLVFQT FNLFPHMNIL ENLILAPMHT LNLSLEEATK 
KALQILSKLS LEDKAKSYPC ELSGGQKQRV AISRALMLNP KYICFDEPTS ALDPSLTKDV 
SNIIKSLAKE NIGVLIITHD MEFAKEVSSR IIKLDSRKIL DDIS