| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1253 |
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| Symbol | |
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| ID | 4206047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1406569 |
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| End bp | 1408017 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642565809 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_698575 |
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| Protein GI | 110803875 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.35553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATAATG CTAATGAAAA CTCTAAAAAC ACTGAAGATT TAGTTTATAA AAACAGATGG
TTTATATTAG CAGTATTAGT AATGCAACCA TTCATGGCAT GTTTAGATAG CAGTATAGTT
AATGTAGCAC TTCCAATTCT TCAAAAAGAA CTTGGTGCAA CTATGGCTGG TACTGAATGG
ATTGTAAGTT CATATTTAAT AATAATTTCT GCATCAATTT TAATCTTTGG TAGATTAGGA
GATATGCATT CAAAAAGTTC AGTATTTATA AAAGGGATTT TAATATTTGT TCTTGGATCT
TTCCTTTGCG GAATATCCCC ATCGCTTACT ATTTTAGTAT TATCTAGAGT TGTGCAAGCT
ATTGGTGCCG CTATGTTAAT GTCAACTAAT CAAGGTATTA TAACAGATGT TTTCTCTCCT
AAGGAAAGAG GAAAAGCTTT AGGTATCTCT GGTTCCTTTG TTGCCTTAGG TTCTATATTA
GGTCCAGCAT TAGGTGGATT CATAGTTACA TATTTCACTT GGCACTATAT TTTCTTAATA
AATGTACCTA TAGGTATAAT TTGCTACATA TTCGCTAAAA AATATCTACC AATAAGAATT
CCTAAAGAAT CTGAGTCAAT GGATAAACCT GGAGCAACAA TGTTTTTCAT TGCTACAATT
CTTATATTTA CATCAATATT AATTAGCCAA CATTTAGGCT TTACTAGCAT ATATGTAATC
CTAGGATTAA TAATTGGAAT TATTGTTCTT GCTTTCTTCT TAATCTATGA AAATAAGGTA
AAAAATCCTA TGCTTCATTT AAGCTTATTT AAAAAACCAA TATTTTCAGT AAGCTTAATA
TGTGCATTTA TTTCCTTTAC TGCAATAAAT ACAATTAATG TTATTCAACC CTTTTACTTA
AATGATATTT TAGGTTATAG TCCTGGAAAA ATTTCAGTTA TAATGACAGC TTATCCAATT
GTATTATTTG TTATTGCACC ACTTAGTGGG ACATTATCAG ATAAAATAGG AAGTAAAATA
CTTACTTTAA TAGGATTATT CTTAACAGGA GTTTCAATGA TTTTATTATC ATCATTAAAT
AGTAACTCAA GTGAAACATC TATATTCCTT ATGTTATCAT TATTAGGTTT TTCAAATGGA
CTATTCCAAT CTCCAAATAC AAACCTTATA ATGTCCTCTG TTCCTAAGGA TAAGCTTGGA
ATAGCGGGTG GTACTAATGC CTTAATAAGA AATTTAGGTC TTGCCTTTGG AGTATCAGCT
TCAACCTCTA TTTTATATGC AAAAATGAGT AAATTAGCTG GTTTTAGAGT TTTAGGATCT
GTTCCCAATA GACCTGATAT ATTTATTTCT GGAATGAGAT TTGTATATAT TTTAGTTGCT
ATTTCATGTT TTATATGCCT TATAATTTCT GTAATTGAAT ATATTCAATC TAAAAAAAAT
AAAAAATAA
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| Protein sequence | MNNANENSKN TEDLVYKNRW FILAVLVMQP FMACLDSSIV NVALPILQKE LGATMAGTEW
IVSSYLIIIS ASILIFGRLG DMHSKSSVFI KGILIFVLGS FLCGISPSLT ILVLSRVVQA
IGAAMLMSTN QGIITDVFSP KERGKALGIS GSFVALGSIL GPALGGFIVT YFTWHYIFLI
NVPIGIICYI FAKKYLPIRI PKESESMDKP GATMFFIATI LIFTSILISQ HLGFTSIYVI
LGLIIGIIVL AFFLIYENKV KNPMLHLSLF KKPIFSVSLI CAFISFTAIN TINVIQPFYL
NDILGYSPGK ISVIMTAYPI VLFVIAPLSG TLSDKIGSKI LTLIGLFLTG VSMILLSSLN
SNSSETSIFL MLSLLGFSNG LFQSPNTNLI MSSVPKDKLG IAGGTNALIR NLGLAFGVSA
STSILYAKMS KLAGFRVLGS VPNRPDIFIS GMRFVYILVA ISCFICLIIS VIEYIQSKKN
KK
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