Gene CPR_0571 details

Gene Information

• Locus tag: CPR_0571
• ID: 4204338
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 680759
• End bp: 681463
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 26%
• IMG OID: 642565131
• Product: glycosyltransferase ycbB
• Protein accession: YP_697898
• Protein GI: 110801664
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0463] Glycosyltransferases involved in cell wall biogenesis

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.50645
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAAGA TATTGTTAAT AATTCCAGCT TTTAATGAAA GTGAAAACTT ACCTAAATTA 
ATCGCTAGTA TAAAGAAAGA ATCTTATGAT TACGATGTAT TAATTATAAA TGATTATTCA 
ACGGATAATA CCGGGAAAGT AGCTAAAGAG TTAGGGGTAA ATGTAATAAA CTTACCATGT 
AATTTAGGTA TTGGAGGTGC TGTACAAACT GGATATAAAT ATGCATATGA AAATGAATAT 
GATTATGCAA TACAAGTTGA TGGTGATGGT CAGCATGATC CAATATATTT AGAGTTATTA 
CATAAAAAAA TAAAGGAAGG ATATAATTTT GTAATTGGTT CAAGGTTTAT TGAAAAGAAA 
GGGTTTCAGT CAACATTTAT AAGAAGAGTA GGGATTCAAT TTTTTTATCA TTTAATAAAA 
TTTCTTGGTA AAGAAAAAAT AACAGATGCA ACATCAGGAT TTAGAATAGC TGATAAAAGT 
GTAATAAAAT TATTTAGTCA GTACTATCCT TCGGATTATC CAGAACCGGA GACAATAATG 
CTATTAATAA AAAATAATTT TAAAATAGCA GAAATTCCAG TTGTAATGAA AGAAAGGGAG 
AATGGAAAAT CATCAATAAA TATTATAAAA TCTATATACT ATATGATAAA GGTTACATTG 
GCAATAATAT TATCATATTT TAGTAAGAAA AGGAGCTATG TATAA 

 

Protein sequence

MDKILLIIPA FNESENLPKL IASIKKESYD YDVLIINDYS TDNTGKVAKE LGVNVINLPC 
NLGIGGAVQT GYKYAYENEY DYAIQVDGDG QHDPIYLELL HKKIKEGYNF VIGSRFIEKK 
GFQSTFIRRV GIQFFYHLIK FLGKEKITDA TSGFRIADKS VIKLFSQYYP SDYPEPETIM 
LLIKNNFKIA EIPVVMKERE NGKSSINIIK SIYYMIKVTL AIILSYFSKK RSYV