Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0558 |
Symbol | |
ID | 4205756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 659866 |
End bp | 660588 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642565115 |
Product | cation transport ATPase yqgG |
Protein accession | YP_697886 |
Protein GI | 110802597 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATTAA CTTTAAGTCT TAAAGATATA ATTATAAGGT TGTTATTAGC AACAATAGTT GGAGGGGTTA TAGGTTATGA AAGGGAGTAT CATAATAGAG CTGCTGGATT TAGAACACAA ATATTAGTTT GTGTAGGCGC AGCTATAGTT TCTTTAATAG AAATAAGATT AGGTCAGGAT GTCTTTGAAT TTGTAAAAGA TAATTATTAT ATAAGAAGTG TAATAAAAAT TGATTATGCT AGATTAGGAT CTCAGTTCAT TTCAGGAATT GGCTTTTTGG GCGCAGGAAC AATATTACAA AATAAAGGAT CAGTAAAAGG GTTAACAACT GCTGCATCAC TATGGGTTGT GGCTTGTCTT GGTTTAGCTA TCGGTATGGG GTATTATAAC TTAGGCATTT TAGGATTTTT ATTCATATTC TTAACCTTAG TAAGCTTAAA GAAGTTTCAA TCTAAATTTA TAACCAAGGC TGGAGAAAAA TGTTTTGAAA TAATATATGA GAAAGATTCA CAAGTTTTAG AGTTTATAGA TAAGATTTTC ACTCAAAAAG GTGTAAAGAT AAAAAGCATA GAGTTTTTTG GAAGAAATAA TAATGAAGCT GTGCAATATA AAAATGCTAT ATATAGAGTT GAATTACCTA ACTATATAGA AGTTGGTGAA ATAATAAATA AATTAAGTAT AAATGACGGA ATTATAAAAA TAAGTGAATA TAATGACATA TAA
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Protein sequence | MGLTLSLKDI IIRLLLATIV GGVIGYEREY HNRAAGFRTQ ILVCVGAAIV SLIEIRLGQD VFEFVKDNYY IRSVIKIDYA RLGSQFISGI GFLGAGTILQ NKGSVKGLTT AASLWVVACL GLAIGMGYYN LGILGFLFIF LTLVSLKKFQ SKFITKAGEK CFEIIYEKDS QVLEFIDKIF TQKGVKIKSI EFFGRNNNEA VQYKNAIYRV ELPNYIEVGE IINKLSINDG IIKISEYNDI
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