Gene CPR_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0558 
Symbol 
ID4205756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp659866 
End bp660588 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content28% 
IMG OID642565115 
Productcation transport ATPase yqgG 
Protein accessionYP_697886 
Protein GI110802597 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTAA CTTTAAGTCT TAAAGATATA ATTATAAGGT TGTTATTAGC AACAATAGTT 
GGAGGGGTTA TAGGTTATGA AAGGGAGTAT CATAATAGAG CTGCTGGATT TAGAACACAA
ATATTAGTTT GTGTAGGCGC AGCTATAGTT TCTTTAATAG AAATAAGATT AGGTCAGGAT
GTCTTTGAAT TTGTAAAAGA TAATTATTAT ATAAGAAGTG TAATAAAAAT TGATTATGCT
AGATTAGGAT CTCAGTTCAT TTCAGGAATT GGCTTTTTGG GCGCAGGAAC AATATTACAA
AATAAAGGAT CAGTAAAAGG GTTAACAACT GCTGCATCAC TATGGGTTGT GGCTTGTCTT
GGTTTAGCTA TCGGTATGGG GTATTATAAC TTAGGCATTT TAGGATTTTT ATTCATATTC
TTAACCTTAG TAAGCTTAAA GAAGTTTCAA TCTAAATTTA TAACCAAGGC TGGAGAAAAA
TGTTTTGAAA TAATATATGA GAAAGATTCA CAAGTTTTAG AGTTTATAGA TAAGATTTTC
ACTCAAAAAG GTGTAAAGAT AAAAAGCATA GAGTTTTTTG GAAGAAATAA TAATGAAGCT
GTGCAATATA AAAATGCTAT ATATAGAGTT GAATTACCTA ACTATATAGA AGTTGGTGAA
ATAATAAATA AATTAAGTAT AAATGACGGA ATTATAAAAA TAAGTGAATA TAATGACATA
TAA
 
Protein sequence
MGLTLSLKDI IIRLLLATIV GGVIGYEREY HNRAAGFRTQ ILVCVGAAIV SLIEIRLGQD 
VFEFVKDNYY IRSVIKIDYA RLGSQFISGI GFLGAGTILQ NKGSVKGLTT AASLWVVACL
GLAIGMGYYN LGILGFLFIF LTLVSLKKFQ SKFITKAGEK CFEIIYEKDS QVLEFIDKIF
TQKGVKIKSI EFFGRNNNEA VQYKNAIYRV ELPNYIEVGE IINKLSINDG IIKISEYNDI