Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0269 |
Symbol | |
ID | 4206153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 327936 |
End bp | 328535 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642564827 |
Product | hypothetical protein |
Protein accession | YP_697599 |
Protein GI | 110803747 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000581001 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATATTA ATAATTTTAA TTCTGAACAA ATAAAATTTT TGGCAGAAGA AATGTCAAAA AACAGTATGG TTTCTTATGA TGATTTACCA AAGTATGATT TATTTCTTTC ACAGGTTATA GACTATCTAA ATGATAAATT TACGGAAGAT AAATTTACTA ATAATATAGT ACAAAATTAT ATTAAAAGTG AGGTAATATC AAAGCCGGAG GATGGGAAAA AGCGTGGATA TACTAAAGTA CACTTAGCTC AATTGGTTTT ATTAAGTTAT ATGAGACCTT TATTAAAAAC CGATGAGATC AAAAAAGTAT TTGCTTTAGC CTTTAATAAT ATTAATGATA GAAGTGATGA TATAATATCT TGGGAAACGG CTTATAAGAT GTTTGGCGAA GTACAAGAAG AGAGCATAAA AAGATTCTTA GAGGTGCCAT TAGTTGACAA CGATAAAATA GAAGAAATAA TACAGGTTTC TGATATAAAA GAAGAAGATA GAGATTGCAT AGTGACTTTC CTAACTGTTA TGACATTAAT AGCACAAGCA AGTGTAGTAA AGAAAGTAGT GCAAAAAATA GTTAATGGAT ATCATAAAGA AGAAAAATAA
|
Protein sequence | MDINNFNSEQ IKFLAEEMSK NSMVSYDDLP KYDLFLSQVI DYLNDKFTED KFTNNIVQNY IKSEVISKPE DGKKRGYTKV HLAQLVLLSY MRPLLKTDEI KKVFALAFNN INDRSDDIIS WETAYKMFGE VQEESIKRFL EVPLVDNDKI EEIIQVSDIK EEDRDCIVTF LTVMTLIAQA SVVKKVVQKI VNGYHKEEK
|
| |